Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 EI24P3-201ENST00000399046 1062 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL049634.3-201ENST00000604968 457 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 Z74696.2-201ENST00000436514 498 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 AL031985.2-201ENST00000600955 480 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AL391219.1-201ENST00000422570 483 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 AC083863.1-201ENST00000438811 231 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 RPL7P9-201ENST00000468715 747 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 MIR3945-201ENST00000581853 98 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AL645927.2-201ENST00000618350 349 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AC073073.2-201ENST00000609827 2578 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AL078604.1-201ENST00000404609 466 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AGGF1P3-201ENST00000493675 1213 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
VPS13CQ709C8 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS13CQ709C8 AL513548.1-201ENST00000562904 1724 ntBASIC3.36□□□□□ -1.87
VPS13CQ709C8 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AL592291.1-201ENST00000403830 352 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 CTSL3P-202ENST00000412179 788 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC004069.2-201ENST00000505438 1114 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 PRO1804-201ENST00000623780 2050 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 BNIP3P41-201ENST00000503774 571 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 KRT19P6-201ENST00000510983 209 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 MIR4513-201ENST00000581077 86 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AP005435.3-201ENST00000531260 3198 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 PRDX3P3-201ENST00000447765 522 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC091516.1-201ENST00000549191 703 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC016957.2-201ENST00000616998 848 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS13CQ709C8 EIF3EP2-201ENST00000423042 1814 ntBASIC3.35□□□□□ -1.87
VPS13CQ709C8 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC006994.1-201ENST00000438212 839 ntBASIC3.34□□□□□ -1.87
VPS13CQ709C8 RPS3AP6-201ENST00000484430 795 ntBASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms