Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC012020.1-201ENST00000624541 1728 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 INTS6P1-201ENST00000504674 2530 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RFX4Q33E94 RNA5SP123-201ENST00000363244 119 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC093719.1-202ENST00000392735 373 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX4Q33E94 MIR1178-201ENST00000408396 91 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 RPL23AP27-201ENST00000415161 451 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 RFESDP1-201ENST00000422350 461 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC099336.2-201ENST00000422457 254 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC097523.2-201ENST00000435551 652 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 CYCSP11-201ENST00000436426 315 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 GSTA7P-201ENST00000438425 448 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC099560.2-201ENST00000457554 255 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 APOOP2-201ENST00000461561 539 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC079804.1-201ENST00000461922 436 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC037198.2-201ENST00000478845 733 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC139783.2-201ENST00000504847 1145 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC090312.1-201ENST00000580637 348 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC090181.2-201ENST00000602975 672 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 GMCL1P2-201ENST00000605230 823 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RFX4Q33E94 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
RFX4Q33E94 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFX4Q33E94 AC139769.1-204ENST00000472297 1931 ntBASIC4.17□□□□□ -1.74
RFX4Q33E94 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFX4Q33E94 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFX4Q33E94 RARSP1-201ENST00000542842 1418 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX4Q33E94 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RFX4Q33E94 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RFX4Q33E94 GCNT6-201ENST00000379591 934 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 JKAMPP1-201ENST00000413804 919 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 HMGB1P32-201ENST00000425971 565 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 RPS26P47-201ENST00000427219 348 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 YWHAEP5-201ENST00000431545 765 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 NRBF2P3-201ENST00000432731 865 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC108463.1-201ENST00000450258 347 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AL121877.1-201ENST00000453704 622 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC133473.1-201ENST00000455173 299 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 RPL7AP6-201ENST00000477943 801 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 SYT14P1-201ENST00000481459 721 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFX4Q33E94 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX4Q33E94 FAM60CP-201ENST00000591086 664 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 AC007390.2-201ENST00000606229 3803 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AL356121.2-201ENST00000624715 780 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RFX4Q33E94 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFX4Q33E94 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.16□□□□□ -1.74
RFX4Q33E94 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms