Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 CDC27P1-201ENST00000445384 715 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC104164.2-201ENST00000496953 495 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AL352979.3-201ENST00000553515 247 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC007224.1-201ENST00000564410 144 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AL121890.2-201ENST00000617644 465 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 RNA5SP196-201ENST00000625967 102 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AP000542.2-201ENST00000623199 6179 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 RNA5SP388-201ENST00000362584 119 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 RN7SKP199-201ENST00000410325 305 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 RPL35P6-201ENST00000490024 372 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AC008958.1-201ENST00000511047 682 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AC006272.2-201ENST00000594725 163 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AL138721.1-201ENST00000616756 179 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AC023509.5-201ENST00000617434 807 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AL445363.3-201ENST00000623080 671 ntBASIC5.26□□□□□ -1.57
RFX7Q2KHR2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX7Q2KHR2 LARP1BP1-201ENST00000506036 1359 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AL022722.2-201ENST00000402519 180 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 RPS27AP11-201ENST00000402798 447 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 HDGFP1-201ENST00000405943 252 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 RNA5SP146-201ENST00000410743 123 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 NRBF2P2-201ENST00000413087 861 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 DYNLL1P7-201ENST00000429273 258 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC105137.1-201ENST00000484355 562 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC010374.1-201ENST00000503762 1237 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AL592156.1-201ENST00000508758 304 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 HMGB1P23-201ENST00000518743 568 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 OR5BC1P-201ENST00000529327 739 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 RN7SL176P-201ENST00000580352 264 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 VN1R85P-201ENST00000601587 426 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 MIR7154-201ENST00000620673 73 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 AL158163.1-201ENST00000603915 1649 ntBASIC5.25□□□□□ -1.57
RFX7Q2KHR2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX7Q2KHR2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 A2MP1-204ENST00000566278 4130 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 SNORA48.7-201ENST00000391302 135 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AMZ2P2-201ENST00000406819 1057 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AL358176.3-201ENST00000420757 454 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 COX6CP15-201ENST00000426313 211 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC114755.5-201ENST00000447760 831 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 ATP1B1P1-201ENST00000509767 915 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms