Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 OR52J1P-201ENST00000450596 932 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 AC079804.1-201ENST00000461922 436 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 MTATP6P25-201ENST00000574491 261 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 FAM106CP-201ENST00000582212 507 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.28□□□□□ -1.72
NRF1Q16656 AL512782.1-201ENST00000603093 364 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC010201.1-201ENST00000605051 540 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 GMCL1P2-201ENST00000605230 823 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC079791.1-201ENST00000605356 973 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AL133406.3-201ENST00000606817 541 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC020634.1-201ENST00000608701 549 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.28□□□□□ -1.72
NRF1Q16656 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 AC135352.1-201ENST00000506173 1418 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.28□□□□□ -1.72
NRF1Q16656 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 AL592182.3-201ENST00000642132 3304 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
NRF1Q16656 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 RNU1-63P-201ENST00000383902 164 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC119751.6-201ENST00000416712 186 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 H2AFZP5-201ENST00000446960 382 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 OR1H1P-201ENST00000448731 937 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 AC108463.1-201ENST00000450258 347 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 AL513533.1-201ENST00000453728 415 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC063943.1-201ENST00000465434 453 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 RN7SL481P-201ENST00000477764 299 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.27□□□□□ -1.73
NRF1Q16656 AC004241.3-201ENST00000611728 517 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 LINC00901.1-201ENST00000617252 152 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 AC074140.1-201ENST00000621617 208 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 AC105105.5-201ENST00000622635 1294 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 ZNF962P-201ENST00000443465 3140 ntBASIC4.27□□□□□ -1.73
NRF1Q16656 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.27□□□□□ -1.73
NRF1Q16656 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NRF1Q16656 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NRF1Q16656 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NRF1Q16656 MAPK10-253ENST00000641010 4072 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AL391684.1-202ENST00000641293 1636 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AL078604.1-201ENST00000404609 466 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 RPS16P5-201ENST00000406501 404 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 RAB28P1-201ENST00000411517 641 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 ATG4AP1-201ENST00000416893 538 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AC244453.4-201ENST00000419150 388 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 ARAFP1-201ENST00000422172 605 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.26□□□□□ -1.73
NRF1Q16656 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.26□□□□□ -1.73
NRF1Q16656 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.26□□□□□ -1.73
NRF1Q16656 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.26□□□□□ -1.73
NRF1Q16656 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.26□□□□□ -1.73
NRF1Q16656 RPL36AP41-201ENST00000493820 306 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 RPS6P4-201ENST00000494693 758 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NRF1Q16656 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.26□□□□□ -1.73
NRF1Q16656 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.26□□□□□ -1.73
NRF1Q16656 RAB9BP1-201ENST00000519581 626 ntBASIC4.26□□□□□ -1.73
NRF1Q16656 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.26□□□□□ -1.73
NRF1Q16656 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms