Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 USP9YP21-201ENST00000420603 432 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.74□□□□□ -1.65
LTBQ06643 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AC090018.1-201ENST00000434369 367 ntBASIC4.74□□□□□ -1.65
LTBQ06643 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.74□□□□□ -1.65
LTBQ06643 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 RPL6P5-201ENST00000445678 828 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC079168.1-201ENST00000458741 345 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC092691.2-201ENST00000461787 803 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC021660.1-201ENST00000465006 554 ntBASIC4.74□□□□□ -1.65
LTBQ06643 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 AC091435.1-201ENST00000505442 584 ntBASIC4.74□□□□□ -1.65
LTBQ06643 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 BRD9P1-201ENST00000529855 560 ntBASIC4.74□□□□□ -1.65
LTBQ06643 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.74□□□□□ -1.65
LTBQ06643 AL356057.1-201ENST00000533798 831 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 PCNPP1-201ENST00000552501 511 ntBASIC4.74□□□□□ -1.65
LTBQ06643 DUXAP6-201ENST00000553858 601 ntBASIC4.74□□□□□ -1.65
LTBQ06643 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 AL121839.1-201ENST00000556233 1185 ntBASIC4.74□□□□□ -1.65
LTBQ06643 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 AC009094.1-201ENST00000564443 426 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC006116.3-201ENST00000592968 361 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC010487.1-201ENST00000594408 1172 ntBASIC4.74□□□□□ -1.65
LTBQ06643 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.74□□□□□ -1.65
LTBQ06643 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.74□□□□□ -1.65
LTBQ06643 AC125494.2-201ENST00000602431 657 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC005021.1-201ENST00000608730 355 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC092106.3-201ENST00000611308 722 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.74□□□□□ -1.65
LTBQ06643 AC015922.4-201ENST00000612568 690 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AC022079.2-201ENST00000619739 566 ntBASIC4.74□□□□□ -1.65
LTBQ06643 AL133370.2-201ENST00000619934 439 ntBASIC4.74□□□□□ -1.65
LTBQ06643 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 MIR7641-1-201ENST00000627518 61 ntBASIC4.74□□□□□ -1.65
LTBQ06643 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.74□□□□□ -1.65
LTBQ06643 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LTBQ06643 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LTBQ06643 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.74□□□□□ -1.65
LTBQ06643 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 MFSD8-213ENST00000641134 1327 ntBASIC4.73□□□□□ -1.65
LTBQ06643 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 MTCO1P7-201ENST00000419523 1542 ntBASIC4.73□□□□□ -1.65
LTBQ06643 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 SMG1P7-201ENST00000565246 2704 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 Y_RNA.169-201ENST00000363745 96 ntBASIC4.73□□□□□ -1.65
LTBQ06643 RN7SKP153-201ENST00000365026 316 ntBASIC4.73□□□□□ -1.65
LTBQ06643 SNORD116-1-201ENST00000384335 95 ntBASIC4.73□□□□□ -1.65
LTBQ06643 MIR105-1-201ENST00000385222 81 ntBASIC4.73□□□□□ -1.65
LTBQ06643 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LTBQ06643 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 USP9YP11-201ENST00000427537 717 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 AC046176.1-201ENST00000435260 1170 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 PTGES3P5-201ENST00000455109 434 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC008280.2-201ENST00000455473 307 ntBASIC4.73□□□□□ -1.65
LTBQ06643 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 RPL7P40-201ENST00000481703 745 ntBASIC4.73□□□□□ -1.65
LTBQ06643 BET1P1-201ENST00000482276 359 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC091544.1-201ENST00000484702 348 ntBASIC4.73□□□□□ -1.65
LTBQ06643 MTND1P22-201ENST00000510572 951 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 AC006427.1-201ENST00000514359 712 ntBASIC4.73□□□□□ -1.65
LTBQ06643 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.73□□□□□ -1.65
LTBQ06643 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 AC100784.1-201ENST00000522790 310 ntBASIC4.73□□□□□ -1.65
LTBQ06643 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.73□□□□□ -1.65
LTBQ06643 MTND4P33-201ENST00000556706 766 ntBASIC4.73□□□□□ -1.65
LTBQ06643 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.73□□□□□ -1.65
LTBQ06643 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 RNF138P2-201ENST00000603490 592 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC079610.2-201ENST00000604818 690 ntBASIC4.73□□□□□ -1.65
LTBQ06643 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms