Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL008729.2-201ENST00000606393 473 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC023813.4-201ENST00000607580 580 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC004241.3-201ENST00000611728 517 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AL133243.1-201ENST00000614487 366 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 MIR7154-201ENST00000620673 73 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC120338.1-201ENST00000625074 1541 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 Z95327.2-201ENST00000414579 1873 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 OR51H2P-202ENST00000641424 3046 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 MIR192-201ENST00000384915 110 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC073136.2-201ENST00000417282 849 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC073335.1-201ENST00000427776 363 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL138878.2-201ENST00000440581 1241 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 HMGB3P9-201ENST00000441799 583 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 OR7L1P-201ENST00000456181 380 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 RN7SL354P-201ENST00000469282 294 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC008676.3-201ENST00000521237 435 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 TRAV11-201ENST00000539512 339 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 SULT1C2P2-201ENST00000562517 294 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL121834.1-201ENST00000572284 509 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 RN7SL176P-201ENST00000580352 264 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC005034.4-201ENST00000603612 899 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 AL669942.2-201ENST00000620352 697 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AC021106.3-201ENST00000623925 531 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 AP002967.1-201ENST00000624203 539 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS1Q01581 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HMGCS1Q01581 MFSD8-216ENST00000641147 4009 ntBASIC4.24□□□□□ -1.73
HMGCS1Q01581 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS1Q01581 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS1Q01581 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 SNORD113.2-201ENST00000364166 89 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC119751.6-201ENST00000416712 186 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 UBTFL3-201ENST00000418934 1024 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AL691447.1-201ENST00000419456 387 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 RPL7AP25-201ENST00000423357 805 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC079804.1-201ENST00000461922 436 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 UBTFL6-201ENST00000477929 1024 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 RN7SL809P-201ENST00000482040 297 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 RPL23AP72-201ENST00000492447 435 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 MTND6P33-201ENST00000571794 183 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 MIR4700-201ENST00000578311 74 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC104785.1-201ENST00000603220 588 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AL133406.3-201ENST00000606817 541 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC009704.2-201ENST00000618739 483 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 MIR7703-201ENST00000620784 77 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AL049536.1-201ENST00000625043 744 ntBASIC4.23□□□□□ -1.73
HMGCS1Q01581 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms