Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HDAC4P56524 AL645927.1-201ENST00000396783 406 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AL359643.1-201ENST00000404109 423 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.22□□□□□ -1.57
HDAC4P56524 XKRYP4-201ENST00000414395 483 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.22□□□□□ -1.57
HDAC4P56524 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 RPL6P5-201ENST00000445678 828 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 XKRYP5-201ENST00000449659 483 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 CYCSP20-201ENST00000473154 315 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC004815.1-201ENST00000484185 331 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC025459.1-201ENST00000504072 156 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC010460.2-201ENST00000509054 677 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC004980.4-201ENST00000513375 203 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 RN7SKP141-201ENST00000516167 338 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.22□□□□□ -1.57
HDAC4P56524 AP003066.2-201ENST00000529375 555 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.22□□□□□ -1.57
HDAC4P56524 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.22□□□□□ -1.57
HDAC4P56524 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 AC091057.3-201ENST00000602684 733 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AL049844.2-201ENST00000604280 628 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC024940.4-201ENST00000605507 246 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC012557.1-201ENST00000607115 611 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC017076.1-201ENST00000607613 578 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AL353600.1-201ENST00000608148 251 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC093799.2-201ENST00000610062 578 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AC007275.1-201ENST00000621243 671 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 AP003497.2-201ENST00000624220 967 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 AC008432.1-201ENST00000615912 1320 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.21□□□□□ -1.57
HDAC4P56524 AC100778.3-201ENST00000580060 1750 ntBASIC5.21□□□□□ -1.57
HDAC4P56524 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.21□□□□□ -1.57
HDAC4P56524 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HDAC4P56524 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
HDAC4P56524 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HDAC4P56524 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 RNA5SP455-201ENST00000365190 119 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 RNU6-244P-201ENST00000391028 104 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.21□□□□□ -1.58
HDAC4P56524 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 RNA5SP498-201ENST00000411342 120 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AC007738.1-201ENST00000413892 348 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC104333.2-201ENST00000422630 192 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 OR7E125P-201ENST00000443450 846 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.21□□□□□ -1.58
HDAC4P56524 MRPL35P2-201ENST00000448009 511 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AL354710.1-201ENST00000453641 246 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 RPL10P17-201ENST00000453852 316 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC108471.1-201ENST00000513977 287 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 CIR1P1-201ENST00000524055 1133 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.21□□□□□ -1.58
HDAC4P56524 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.21□□□□□ -1.58
HDAC4P56524 NMNAT1P1-201ENST00000554095 876 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 YWHAZP1-201ENST00000556286 722 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AC090666.1-201ENST00000578241 445 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AC124283.4-201ENST00000581815 456 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC087283.1-201ENST00000604029 1074 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AL121612.2-201ENST00000612261 482 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AC091046.2-201ENST00000620775 665 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 AC090506.2-201ENST00000624521 419 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HDAC4P56524 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
HDAC4P56524 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HDAC4P56524 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDAC4P56524 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.21□□□□□ -1.58
HDAC4P56524 VN2R3P-201ENST00000422626 1412 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.21□□□□□ -1.58
HDAC4P56524 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms