Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCN3P51790 MTATP6P9-201ENST00000515039 680 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCN3P51790 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCN3P51790 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN3P51790 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN3P51790 RPL12P25-202ENST00000598100 674 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC005034.4-201ENST00000603612 899 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 SUMO2P14-201ENST00000604488 293 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC018926.1-201ENST00000616335 435 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 MIR6758-201ENST00000620653 63 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCN3P51790 AL138955.1-201ENST00000622881 1040 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC004232.3-201ENST00000622977 525 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC068880.4-201ENST00000623082 495 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC090772.4-201ENST00000623599 362 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN3P51790 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN3P51790 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLCN3P51790 AC133552.1-201ENST00000569988 4007 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 RNU6-252P-201ENST00000363232 107 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 RNU4-31P-201ENST00000384211 141 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 MIR129-1-201ENST00000384972 72 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 ARL4AP5-201ENST00000404372 599 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 AC007738.1-201ENST00000413892 348 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AL158050.1-201ENST00000416077 457 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 REREP1Y-201ENST00000422655 198 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 RPL18P10-201ENST00000425606 538 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 MTCYBP32-201ENST00000427945 1084 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 C4BPAP2-201ENST00000428434 478 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 REREP2Y-201ENST00000439103 200 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 H2AFZP5-201ENST00000446960 382 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN3P51790 HMGB1P5-202ENST00000451497 985 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 MTND4LP2-201ENST00000502312 285 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 HPRT1P1-201ENST00000509498 657 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLCN3P51790 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN3P51790 C1DP5-201ENST00000525775 383 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AP001781.1-201ENST00000530977 207 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCN3P51790 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCN3P51790 BNIP3P31-201ENST00000604515 566 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCN3P51790 AC112503.2-201ENST00000609005 552 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN3P51790 OR9K1P-202ENST00000641111 3217 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
CLCN3P51790 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN3P51790 DDX18P5-201ENST00000534547 1306 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 MTND5P11-201ENST00000511037 1812 ntBASIC5.18□□□□□ -1.58
CLCN3P51790 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
CLCN3P51790 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCN3P51790 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCN3P51790 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCN3P51790 AC100778.3-201ENST00000580060 1750 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLCN3P51790 AC073136.1-201ENST00000449426 2884 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 AL137100.1-201ENST00000556703 1620 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCN3P51790 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCN3P51790 E2F6P2-201ENST00000420708 748 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCN3P51790 RPS27AP7-201ENST00000422792 455 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCN3P51790 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCN3P51790 AL512661.1-201ENST00000434586 1253 ntBASIC5.17□□□□□ -1.58
CLCN3P51790 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCN3P51790 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms