Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AP005019.3-201ENST00000620418 560 ntBASIC4.8□□□□□ -1.64
CASP4P49662 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.8□□□□□ -1.64
CASP4P49662 AC002044.3-201ENST00000623314 541 ntBASIC4.8□□□□□ -1.64
CASP4P49662 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
CASP4P49662 AC139713.2-214ENST00000642059 1811 ntBASIC4.8□□□□□ -1.64
CASP4P49662 AP001273.1-201ENST00000624493 3152 ntBASIC4.8□□□□□ -1.64
CASP4P49662 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CASP4P49662 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CASP4P49662 AC025031.4-201ENST00000621248 3271 ntBASIC4.8□□□□□ -1.64
CASP4P49662 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CASP4P49662 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.8□□□□□ -1.64
CASP4P49662 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CASP4P49662 AC107027.3-201ENST00000565095 3473 ntBASIC4.8□□□□□ -1.64
CASP4P49662 AC083843.3-201ENST00000623679 2186 ntBASIC4.8□□□□□ -1.64
CASP4P49662 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
CASP4P49662 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 SNORA56-201ENST00000383966 129 ntBASIC4.79□□□□□ -1.64
CASP4P49662 MIR3065-201ENST00000390137 79 ntBASIC4.79□□□□□ -1.64
CASP4P49662 U3.22-201ENST00000391120 215 ntBASIC4.79□□□□□ -1.64
CASP4P49662 RNA5SP105-201ENST00000391123 113 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AL583835.1-201ENST00000399570 407 ntBASIC4.79□□□□□ -1.64
CASP4P49662 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.79□□□□□ -1.64
CASP4P49662 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CASP4P49662 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.79□□□□□ -1.64
CASP4P49662 AC114495.1-201ENST00000441274 436 ntBASIC4.79□□□□□ -1.64
CASP4P49662 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 RPS6P2-201ENST00000454208 705 ntBASIC4.79□□□□□ -1.64
CASP4P49662 RPL35AP15-201ENST00000468042 339 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AC012158.1-204ENST00000483430 465 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AC013356.1-201ENST00000489027 564 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AC025674.1-201ENST00000507074 324 ntBASIC4.79□□□□□ -1.64
CASP4P49662 ATP1B1P1-201ENST00000509767 915 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP4P49662 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 AC100770.1-201ENST00000532310 322 ntBASIC4.79□□□□□ -1.64
CASP4P49662 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
CASP4P49662 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP4P49662 AL390726.5-202ENST00000564800 256 ntBASIC4.79□□□□□ -1.64
CASP4P49662 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 AC079587.1-201ENST00000603846 277 ntBASIC4.79□□□□□ -1.64
CASP4P49662 MIR6820-201ENST00000611508 62 ntBASIC4.79□□□□□ -1.64
CASP4P49662 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP4P49662 AC023509.5-201ENST00000617434 807 ntBASIC4.79□□□□□ -1.64
CASP4P49662 A2MP1-204ENST00000566278 4130 ntBASIC4.79□□□□□ -1.64
CASP4P49662 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASP4P49662 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CASP4P49662 SCN1A-220ENST00000641603 12506 ntBASIC4.78□□□□□ -1.64
CASP4P49662 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP4P49662 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP4P49662 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP4P49662 AC005332.5-201ENST00000591222 2919 ntBASIC4.78□□□□□ -1.64
CASP4P49662 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CASP4P49662 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASP4P49662 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASP4P49662 MIR331-201ENST00000362302 94 ntBASIC4.78□□□□□ -1.64
CASP4P49662 RNA5SP447-201ENST00000363749 119 ntBASIC4.78□□□□□ -1.64
CASP4P49662 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP4P49662 MT-RNR1-201ENST00000389680 954 ntBASIC4.78□□□□□ -1.64
CASP4P49662 HDGFP1-201ENST00000405943 252 ntBASIC4.78□□□□□ -1.64
CASP4P49662 MIR1911-201ENST00000410783 80 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP4P49662 AL356387.2-201ENST00000422272 243 ntBASIC4.78□□□□□ -1.64
CASP4P49662 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP4P49662 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AL392003.1-201ENST00000434394 243 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC092447.2-201ENST00000435487 669 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP4P49662 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP4P49662 snoU13.1-201ENST00000459157 104 ntBASIC4.78□□□□□ -1.64
CASP4P49662 HMGN1P8-201ENST00000463578 288 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC105918.1-201ENST00000474399 838 ntBASIC4.78□□□□□ -1.64
CASP4P49662 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
CASP4P49662 RNU6-319P-201ENST00000516025 108 ntBASIC4.78□□□□□ -1.64
CASP4P49662 OR5BC1P-201ENST00000529327 739 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP4P49662 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP4P49662 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CASP4P49662 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.78□□□□□ -1.64
CASP4P49662 AC008759.1-201ENST00000589783 983 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AL354984.3-201ENST00000604803 325 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC117490.2-201ENST00000610042 594 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AL121873.1-201ENST00000616013 524 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC007546.1-201ENST00000619452 559 ntBASIC4.78□□□□□ -1.64
CASP4P49662 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP4P49662 MAPK10-286ENST00000641208 8747 ntBASIC4.78□□□□□ -1.64
CASP4P49662 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP4P49662 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CASP4P49662 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms