Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AL391684.1-202ENST00000641293 1636 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 RN7SKP149-201ENST00000363008 344 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CR1P49238 RPS24P12-201ENST00000402084 394 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 SPTLC1P2-201ENST00000407089 121 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 RNA5SP113-201ENST00000410486 84 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CR1P49238 RSU1P3-201ENST00000412878 835 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 AC004074.1-201ENST00000421810 1063 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 RAD1P2-201ENST00000446414 663 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 RPS26P28-201ENST00000470806 348 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 RN7SL177P-201ENST00000476596 299 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 RPS4XP14-201ENST00000493072 781 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 RNA5SP360-201ENST00000516555 118 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 SCARNA21.2-201ENST00000516600 166 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 SOX5P1-201ENST00000524155 1127 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CR1P49238 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AC027455.1-201ENST00000574104 594 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AC022884.3-201ENST00000579571 248 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 RN7SL753P-201ENST00000581238 290 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 SS18L2P2-201ENST00000583960 235 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CR1P49238 HMGB2P1-201ENST00000591146 634 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 OR7E18P-201ENST00000592589 702 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CR1P49238 AL512782.1-201ENST00000603093 364 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 AL031320.1-201ENST00000604177 357 ntBASIC4.04□□□□□ -1.76
CX3CR1P49238 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CR1P49238 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
CX3CR1P49238 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CX3CR1P49238 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CX3CR1P49238 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 SNORA74A-201ENST00000364089 198 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC140479.3-201ENST00000418944 1126 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC073464.3-201ENST00000422564 712 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC016831.4-201ENST00000438302 307 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AL935212.3-201ENST00000450729 284 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC110749.1-201ENST00000462007 357 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC026348.1-201ENST00000462549 1053 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC104763.1-201ENST00000475274 360 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 RPL36AP41-201ENST00000493820 306 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 RN7SKP276-201ENST00000516242 268 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 OR7E10P-201ENST00000526420 991 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.03□□□□□ -1.76
CX3CR1P49238 MTND6P33-201ENST00000571794 183 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.03□□□□□ -1.76
CX3CR1P49238 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 AP000894.4-201ENST00000610185 483 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 MIR7154-201ENST00000620673 73 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 BMS1P21-201ENST00000634565 365 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CX3CR1P49238 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CR1P49238 AC135352.1-201ENST00000506173 1418 ntBASIC4.03□□□□□ -1.76
CX3CR1P49238 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CX3CR1P49238 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.03□□□□□ -1.76
CX3CR1P49238 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CR1P49238 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CX3CR1P49238 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CX3CR1P49238 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 Z98755.1-201ENST00000407015 1384 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms