Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.37□□□□□ -1.55
BDNFP23560 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 AL022311.1-201ENST00000623726 19416 ntBASIC5.37□□□□□ -1.55
BDNFP23560 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
BDNFP23560 SNORA51.8-201ENST00000384234 132 ntBASIC5.37□□□□□ -1.55
BDNFP23560 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BDNFP23560 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.37□□□□□ -1.55
BDNFP23560 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 AC009238.2-201ENST00000431026 355 ntBASIC5.37□□□□□ -1.55
BDNFP23560 CDY14P-201ENST00000431260 1014 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.37□□□□□ -1.55
BDNFP23560 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.37□□□□□ -1.55
BDNFP23560 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.37□□□□□ -1.55
BDNFP23560 CDY12P-201ENST00000440679 1015 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 CDY13P-201ENST00000445813 1015 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 RPL7P55-201ENST00000450522 746 ntBASIC5.37□□□□□ -1.55
BDNFP23560 CDY23P-201ENST00000451661 1014 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.37□□□□□ -1.55
BDNFP23560 AC231760.1-201ENST00000498002 260 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC083829.1-201ENST00000503756 657 ntBASIC5.37□□□□□ -1.55
BDNFP23560 IGBP1P5-201ENST00000507524 1000 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 SERPINE4P-201ENST00000554978 281 ntBASIC5.37□□□□□ -1.55
BDNFP23560 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.37□□□□□ -1.55
BDNFP23560 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.37□□□□□ -1.55
BDNFP23560 AP005119.2-201ENST00000579735 1105 ntBASIC5.37□□□□□ -1.55
BDNFP23560 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BDNFP23560 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BDNFP23560 BNIP3P32-201ENST00000600015 554 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.37□□□□□ -1.55
BDNFP23560 AC099669.2-201ENST00000616549 437 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC073569.3-201ENST00000619055 682 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AL445528.2-201ENST00000620582 470 ntBASIC5.37□□□□□ -1.55
BDNFP23560 AC132825.7-201ENST00000638744 335 ntBASIC5.37□□□□□ -1.55
BDNFP23560 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BDNFP23560 MFSD8-220ENST00000641243 1422 ntBASIC5.37□□□□□ -1.55
BDNFP23560 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
BDNFP23560 INTS6P1-201ENST00000504674 2530 ntBASIC5.37□□□□□ -1.55
BDNFP23560 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 AP001002.1-201ENST00000625148 1513 ntBASIC5.37□□□□□ -1.55
BDNFP23560 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
BDNFP23560 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BDNFP23560 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BDNFP23560 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
BDNFP23560 PNPT1P2-201ENST00000456768 2050 ntBASIC5.36□□□□□ -1.55
BDNFP23560 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.36□□□□□ -1.55
BDNFP23560 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.36□□□□□ -1.55
BDNFP23560 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BDNFP23560 AL512646.1-201ENST00000269395 1077 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RNA5SP428-201ENST00000365129 132 ntBASIC5.36□□□□□ -1.55
BDNFP23560 U3.15-201ENST00000365398 212 ntBASIC5.36□□□□□ -1.55
BDNFP23560 GLULP6-201ENST00000399502 913 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RN7SKP97-201ENST00000410966 333 ntBASIC5.36□□□□□ -1.55
BDNFP23560 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.36□□□□□ -1.55
BDNFP23560 RPL31P45-201ENST00000419532 356 ntBASIC5.36□□□□□ -1.55
BDNFP23560 EIF4A1P1-201ENST00000420241 934 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.36□□□□□ -1.55
BDNFP23560 RPL37P1-201ENST00000432310 284 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.36□□□□□ -1.55
BDNFP23560 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.36□□□□□ -1.55
BDNFP23560 IGHV5-78-201ENST00000450948 295 ntBASIC5.36□□□□□ -1.55
BDNFP23560 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RPL35AP28-201ENST00000459730 331 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC098799.3-201ENST00000506095 438 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC027338.1-201ENST00000514840 825 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RNU6-1102P-201ENST00000516149 96 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RNA5SP43-201ENST00000516559 110 ntBASIC5.36□□□□□ -1.55
BDNFP23560 HMGB1P1-201ENST00000522557 636 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AP001922.4-201ENST00000526967 290 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.36□□□□□ -1.55
BDNFP23560 AL442163.2-201ENST00000553912 710 ntBASIC5.36□□□□□ -1.55
BDNFP23560 NMNAT1P1-201ENST00000554095 876 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC106734.1-201ENST00000568646 663 ntBASIC5.36□□□□□ -1.55
BDNFP23560 MEMO1P5-201ENST00000604810 406 ntBASIC5.36□□□□□ -1.55
BDNFP23560 RMST_10.1-201ENST00000616309 154 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.36□□□□□ -1.55
BDNFP23560 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.36□□□□□ -1.55
BDNFP23560 AC017007.4-201ENST00000503353 1352 ntBASIC5.36□□□□□ -1.55
BDNFP23560 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
BDNFP23560 ASNSP1-204ENST00000641977 1664 ntBASIC5.36□□□□□ -1.55
BDNFP23560 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BDNFP23560 AL133412.1-201ENST00000380194 2992 ntBASIC5.36□□□□□ -1.55
BDNFP23560 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BDNFP23560 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.36□□□□□ -1.55
BDNFP23560 AC112198.2-201ENST00000426589 6996 ntBASIC5.35□□□□□ -1.55
BDNFP23560 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BDNFP23560 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms