Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 DEFB109F-201ENST00000491870 277 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A1P20908 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC124068.1-201ENST00000563131 678 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AC053481.4-201ENST00000583164 216 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AC091178.1-203ENST00000584586 279 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A1P20908 VN1R92P-201ENST00000598511 928 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 COX6CP4-201ENST00000605798 228 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AP001642.1-201ENST00000624727 2117 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 FP325313.1-201ENST00000638228 703 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
COL5A1P20908 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A1P20908 AL133268.1-201ENST00000405676 1401 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AP001284.1-201ENST00000528393 2118 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 ENSAP1-201ENST00000392855 326 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 RPL7P2-201ENST00000427639 268 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AL117339.2-201ENST00000430475 180 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC007389.2-201ENST00000434630 306 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 VN1R105P-201ENST00000486595 910 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 KCTD9P2-201ENST00000512203 1013 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 OR5D2P-201ENST00000524390 911 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL5A1P20908 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL5A1P20908 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 AC099654.3-201ENST00000447087 1546 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 AC005261.6-201ENST00000623072 1387 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 RPS3AP12-201ENST00000443616 753 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 DDX39BP2-208ENST00000453923 258 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.18□□□□□ -1.74
COL5A1P20908 FTH1P21-201ENST00000512179 511 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC093014.1-201ENST00000548926 724 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC005520.3-201ENST00000602874 370 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AL161729.3-201ENST00000603533 673 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AC007179.3-201ENST00000604976 235 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
COL5A1P20908 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL5A1P20908 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 AL121839.2-201ENST00000565058 6943 ntBASIC4.18□□□□□ -1.74
COL5A1P20908 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL5A1P20908 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.18□□□□□ -1.74
COL5A1P20908 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL5A1P20908 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL5A1P20908 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 RPS20P14-201ENST00000412545 360 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms