Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RN7SKP17-201ENST00000411242 351 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.82□□□□□ -1.32
LIG1P18858 USP9YP18-201ENST00000425912 695 ntBASIC6.82□□□□□ -1.32
LIG1P18858 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.82□□□□□ -1.32
LIG1P18858 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 AC023141.3-201ENST00000436698 278 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 AP000542.1-201ENST00000448473 371 ntBASIC6.82□□□□□ -1.32
LIG1P18858 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.82□□□□□ -1.32
LIG1P18858 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.82□□□□□ -1.32
LIG1P18858 PPIAP7-201ENST00000454070 489 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC072039.1-201ENST00000477611 581 ntBASIC6.82□□□□□ -1.32
LIG1P18858 OR7E99P-201ENST00000505750 922 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.82□□□□□ -1.32
LIG1P18858 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC078899.1-201ENST00000521432 1185 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AP000620.1-201ENST00000527147 504 ntBASIC6.82□□□□□ -1.32
LIG1P18858 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.82□□□□□ -1.32
LIG1P18858 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.82□□□□□ -1.32
LIG1P18858 AC026826.3-201ENST00000561747 158 ntBASIC6.82□□□□□ -1.32
LIG1P18858 MIR4675-201ENST00000577898 77 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AP001823.1-201ENST00000604056 1003 ntBASIC6.82□□□□□ -1.32
LIG1P18858 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AL080312.2-201ENST00000613001 630 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC072046.2-201ENST00000618366 268 ntBASIC6.82□□□□□ -1.32
LIG1P18858 FAM27E2-201ENST00000619668 403 ntBASIC6.82□□□□□ -1.32
LIG1P18858 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.82□□□□□ -1.32
LIG1P18858 AC016717.3-201ENST00000624730 554 ntBASIC6.82□□□□□ -1.32
LIG1P18858 AC025048.6-202ENST00000627667 438 ntBASIC6.82□□□□□ -1.32
LIG1P18858 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.82□□□□□ -1.32
LIG1P18858 AC004076.2-201ENST00000620532 3323 ntBASIC6.82□□□□□ -1.32
LIG1P18858 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LIG1P18858 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 RLIMP2-201ENST00000427891 1563 ntBASIC6.82□□□□□ -1.32
LIG1P18858 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 SEC63P2-201ENST00000503863 1939 ntBASIC6.82□□□□□ -1.32
LIG1P18858 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LIG1P18858 AC107021.2-201ENST00000567714 2095 ntBASIC6.81□□□□□ -1.32
LIG1P18858 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LIG1P18858 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
LIG1P18858 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIG1P18858 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIG1P18858 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LIG1P18858 AC016745.2-201ENST00000608834 3443 ntBASIC6.81□□□□□ -1.32
LIG1P18858 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIG1P18858 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LIG1P18858 OR10R3P-201ENST00000361688 942 ntBASIC6.81□□□□□ -1.32
LIG1P18858 RNA5SP433-201ENST00000364491 114 ntBASIC6.81□□□□□ -1.32
LIG1P18858 OR6C69P-201ENST00000394268 893 ntBASIC6.81□□□□□ -1.32
LIG1P18858 RPS7P13-201ENST00000413955 498 ntBASIC6.81□□□□□ -1.32
LIG1P18858 NPM1P4-201ENST00000414095 812 ntBASIC6.81□□□□□ -1.32
LIG1P18858 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.81□□□□□ -1.32
LIG1P18858 AC019050.1-201ENST00000418508 492 ntBASIC6.81□□□□□ -1.32
LIG1P18858 RPA2P2-201ENST00000419698 796 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC006065.1-201ENST00000422539 802 ntBASIC6.81□□□□□ -1.32
LIG1P18858 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LIG1P18858 AC069154.1-201ENST00000432914 542 ntBASIC6.81□□□□□ -1.32
LIG1P18858 MTND3P21-201ENST00000433774 331 ntBASIC6.81□□□□□ -1.32
LIG1P18858 OR3D1P-201ENST00000438288 955 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AL353662.1-201ENST00000439099 327 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.81□□□□□ -1.32
LIG1P18858 RPL12P39-201ENST00000455456 496 ntBASIC6.81□□□□□ -1.32
LIG1P18858 RPL5P24-201ENST00000463742 885 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AC090602.1-201ENST00000469695 252 ntBASIC6.81□□□□□ -1.32
LIG1P18858 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC114781.4-201ENST00000513707 639 ntBASIC6.81□□□□□ -1.32
LIG1P18858 TCP11X3P-202ENST00000514289 1254 ntBASIC6.81□□□□□ -1.32
LIG1P18858 RNU6-506P-201ENST00000516553 94 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.81□□□□□ -1.32
LIG1P18858 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC005832.3-201ENST00000537929 631 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.81□□□□□ -1.32
LIG1P18858 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.81□□□□□ -1.32
LIG1P18858 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 AC122134.1-201ENST00000565664 1104 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AC002519.2-203ENST00000567043 837 ntBASIC6.81□□□□□ -1.32
LIG1P18858 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.81□□□□□ -1.32
LIG1P18858 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.81□□□□□ -1.32
LIG1P18858 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.81□□□□□ -1.32
LIG1P18858 MIR4666A-201ENST00000580160 79 ntBASIC6.81□□□□□ -1.32
LIG1P18858 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms