Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HIGD1AP5-201ENST00000529959 259 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 MTCYBP13-201ENST00000578634 1093 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 PART1_2.1-201ENST00000612397 250 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 AL352984.2-202ENST00000613699 155 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 VN1R9P-201ENST00000614184 867 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOAP06340 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOAP06340 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOAP06340 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.87□□□□□ -1.47
HLA-DOAP06340 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOAP06340 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOAP06340 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC008432.1-201ENST00000615912 1320 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 RPS4XP9-201ENST00000405151 780 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC090960.1-201ENST00000421072 306 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 RPS27AP6-201ENST00000427962 448 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC234781.3-201ENST00000452540 973 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AURKAPS2-201ENST00000454983 333 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 RPS29P33-201ENST00000456717 146 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 GYG1P1-201ENST00000460864 698 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC008897.1-201ENST00000494006 347 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC091951.3-201ENST00000504093 246 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 MTND4P2-201ENST00000507767 1203 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC092593.2-201ENST00000513866 913 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC027369.5-201ENST00000533838 755 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC093524.1-201ENST00000564266 1094 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC124283.4-201ENST00000581815 456 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AC010503.3-201ENST00000594355 540 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 BMS1P7-201ENST00000602440 1052 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 AL049794.2-201ENST00000616301 365 ntBASIC5.86□□□□□ -1.47
HLA-DOAP06340 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOAP06340 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOAP06340 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
HLA-DOAP06340 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DOAP06340 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOAP06340 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOAP06340 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 AC010132.2-201ENST00000295493 1043 ntBASIC5.85□□□□□ -1.47
HLA-DOAP06340 AC008549.2-201ENST00000333482 706 ntBASIC5.85□□□□□ -1.47
HLA-DOAP06340 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DOAP06340 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOAP06340 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms