Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
USH2AO75445 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC1.87□□□□□ -2.11
USH2AO75445 AC005326.1-201ENST00000429197 123 ntBASIC1.87□□□□□ -2.11
USH2AO75445 RPL7AP49-201ENST00000429522 581 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC1.87□□□□□ -2.11
USH2AO75445 AL591438.1-201ENST00000433508 581 ntBASIC1.87□□□□□ -2.11
USH2AO75445 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 AF213884.1-201ENST00000488102 463 ntBASIC1.87□□□□□ -2.11
USH2AO75445 RNA5SP73-201ENST00000516744 108 ntBASIC1.87□□□□□ -2.11
USH2AO75445 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC1.87□□□□□ -2.11
USH2AO75445 MIR5187-201ENST00000583479 76 ntBASIC1.87□□□□□ -2.11
USH2AO75445 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 AL132656.3-201ENST00000606384 1595 ntBASIC1.87□□□□□ -2.11
USH2AO75445 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 SNORA80A-201ENST00000363922 136 ntBASIC1.87□□□□□ -2.11
USH2AO75445 RNU1-33P-201ENST00000364249 162 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC008171.1-201ENST00000395058 200 ntBASIC1.87□□□□□ -2.11
USH2AO75445 RN7SKP182-201ENST00000410772 298 ntBASIC1.87□□□□□ -2.11
USH2AO75445 NPM1P26-201ENST00000426339 738 ntBASIC1.87□□□□□ -2.11
USH2AO75445 COX6CP13-201ENST00000428703 226 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AL512326.1-201ENST00000443050 721 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 AC006064.5-201ENST00000541782 248 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 AC025175.1-201ENST00000606482 759 ntBASIC1.87□□□□□ -2.11
USH2AO75445 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 AC006453.5-201ENST00000636451 619 ntBASIC1.87□□□□□ -2.11
USH2AO75445 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 AC010733.2-201ENST00000589496 5702 ntBASIC1.87□□□□□ -2.11
USH2AO75445 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 BMPR1APS1-201ENST00000403332 1598 ntBASIC1.86□□□□□ -2.11
USH2AO75445 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 EED-206ENST00000527888 1422 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 AC108032.1-201ENST00000416706 207 ntBASIC1.86□□□□□ -2.11
USH2AO75445 HSPD1P21-201ENST00000436541 245 ntBASIC1.86□□□□□ -2.11
USH2AO75445 RSL24D1P3-201ENST00000449255 495 ntBASIC1.86□□□□□ -2.11
USH2AO75445 HPRT1P2-201ENST00000505250 544 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 NDUFA5P2-201ENST00000519723 344 ntBASIC1.86□□□□□ -2.11
USH2AO75445 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 AL590004.4-201ENST00000566733 7060 ntBASIC1.86□□□□□ -2.11
USH2AO75445 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 AP003972.1-201ENST00000625192 5446 ntBASIC1.86□□□□□ -2.11
USH2AO75445 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 HSFY4P-201ENST00000415994 1181 ntBASIC1.86□□□□□ -2.11
USH2AO75445 BX842559.1-201ENST00000419615 532 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AL158156.1-201ENST00000422509 473 ntBASIC1.86□□□□□ -2.11
USH2AO75445 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 AGGF1P3-201ENST00000493675 1213 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AP001207.2-201ENST00000519490 539 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 SPATA31D2P-201ENST00000429999 4388 ntBASIC1.86□□□□□ -2.11
USH2AO75445 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH2AO75445 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 DNAJA1P3-201ENST00000399417 1194 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AL035423.1-201ENST00000420331 213 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 RPEP2-201ENST00000432149 701 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms