Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC022832.1-201ENST00000530718 645 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM38O00635 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC023824.3-201ENST00000569003 562 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC090312.2-201ENST00000582687 378 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC015726.1-201ENST00000602353 681 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC069304.3-201ENST00000603938 1084 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AL358072.1-201ENST00000604156 575 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC005377.1-201ENST00000605126 456 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 MIR6798-201ENST00000612887 67 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC079395.3-201ENST00000615161 484 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AL355493.4-201ENST00000618530 292 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AL078595.3-201ENST00000623815 1166 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AL512506.2-201ENST00000624472 458 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC011493.1-201ENST00000596753 1632 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 RNA5SP443-201ENST00000363083 132 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 Y_RNA.318-201ENST00000365131 97 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 RNU1-106P-201ENST00000384382 164 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 TAS2R15P-201ENST00000390674 928 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 MIR550A3-201ENST00000390735 95 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 MTATP6P20-201ENST00000414147 562 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 MTCO2P21-201ENST00000419780 677 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC108075.1-201ENST00000424692 529 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 OSTCP5-201ENST00000425293 453 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 TXNL1P1-201ENST00000429528 554 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 FAM96AP1-201ENST00000430879 482 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 RPL35AP28-201ENST00000459730 331 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC020898.1-201ENST00000474167 787 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 ENPP7P11-201ENST00000505915 627 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC098976.1-201ENST00000513014 541 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC112673.1-201ENST00000513168 575 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 UBTFL10-201ENST00000528532 562 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC027455.1-201ENST00000574104 594 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 RBM22P1-201ENST00000578589 1214 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM38O00635 VN1R88P-201ENST00000596787 292 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 Z94722.1-201ENST00000604328 474 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC024060.1-201ENST00000607052 494 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC133644.2-201ENST00000608142 540 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 MIR6748-201ENST00000610433 71 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM38O00635 AC092140.2-201ENST00000618027 521 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM38O00635 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC046144.1-201ENST00000478559 1853 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 AC068870.1-201ENST00000563737 2455 ntBASIC5.38□□□□□ -1.55
TRIM38O00635 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM38O00635 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM38O00635 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM38O00635 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM38O00635 OR52E6-202ENST00000379946 954 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms