Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR1271-201ENST00000408537 86 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 CR848007.2-201ENST00000424918 787 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 RPL7L1P1-201ENST00000448259 785 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC017099.1-201ENST00000448261 1028 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 RHEBP2-201ENST00000450289 600 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 STRADBP1-201ENST00000478954 1281 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC025674.1-201ENST00000507074 324 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 RNU6-760P-201ENST00000516078 97 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC092868.3-201ENST00000560515 784 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 KPNA2P3-201ENST00000584190 848 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 RN7SL435P-201ENST00000584418 282 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 HMGB1P51-201ENST00000605166 638 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AL121890.3-201ENST00000618494 516 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC015722.2-201ENST00000622210 551 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC073592.7-201ENST00000623659 507 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 MIR6830-201ENST00000636015 70 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AL022393.1-201ENST00000625142 1677 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 USP9YP19-201ENST00000412165 485 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AL356387.2-201ENST00000422272 243 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC023141.6-201ENST00000429418 337 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 FTH1P16-201ENST00000435241 552 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 ARL5AP3-201ENST00000439327 386 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AL935212.3-201ENST00000450729 284 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 ISCUP1-201ENST00000454451 448 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 IGBP1P5-201ENST00000507524 1000 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 RN7SKP122-201ENST00000515923 296 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC074029.2-201ENST00000551045 634 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC023575.1-201ENST00000580510 358 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC090948.1-201ENST00000607464 549 ntBASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.68□□□□□ -1.66
NEDD8-MDP1E9PL57 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC000123.3-201ENST00000624029 4975 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 Z95327.2-201ENST00000414579 1873 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 VN2R3P-201ENST00000422626 1412 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 MIR421-201ENST00000365696 85 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 SDHCP2-201ENST00000398565 501 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 RPL23AP59-201ENST00000399415 461 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 ST13P16-201ENST00000401760 781 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AP001324.1-201ENST00000428553 399 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC011998.1-201ENST00000433403 117 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 TMX2P1-201ENST00000436507 708 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 FHP1-201ENST00000442741 703 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 RPS15AP29-201ENST00000445539 400 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 EIF2S2P4-201ENST00000461070 984 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC109327.1-201ENST00000471666 403 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 RPL21P6-201ENST00000479171 504 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC068587.1-201ENST00000483613 781 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 NIP7P2-201ENST00000485801 544 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms