Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC66A2RUB6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC66A2RUB6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC66A2RUB6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC66A2RUB6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC66A2RUB6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 MFSD8-219ENST00000641228 2559 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 RNU6-249P-201ENST00000363016 102 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 RNU6-192P-201ENST00000391253 100 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AL359643.1-201ENST00000404109 423 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 RNU6-77P-201ENST00000410554 91 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 MTCO2P3-201ENST00000442543 421 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 GTF3AP5-201ENST00000442645 697 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 HMGB1P16-201ENST00000447155 540 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 RPL31P44-201ENST00000447680 377 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 MEMO1P4-201ENST00000453590 386 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 RPL7P18-201ENST00000478965 734 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC073522.1-201ENST00000483312 377 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 WBP1LP4-201ENST00000505043 344 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC091874.2-201ENST00000505889 720 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 TOMM20P1-201ENST00000534518 427 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AL845552.1-201ENST00000556820 323 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC091078.2-201ENST00000557145 559 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AP005119.1-201ENST00000580956 292 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AP000811.1-201ENST00000603803 651 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 MIR6071-201ENST00000616741 78 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 SMG1P7-201ENST00000565246 2704 ntBASIC6.08□□□□□ -1.44
CCDC66A2RUB6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC66A2RUB6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 BTBD10P1-201ENST00000549824 1352 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 HSPD1P9-201ENST00000420325 1636 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 IL6STP1-201ENST00000346911 1020 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 OR1L1-202ENST00000373686 1083 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 MIR320B1-201ENST00000390209 79 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 Y_RNA.599-201ENST00000410489 109 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 RN7SKP59-201ENST00000410520 314 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 NRBF2P2-201ENST00000413087 861 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 OR10T1P-201ENST00000424327 947 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 DLGAP5P1-201ENST00000430307 464 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 EIF5AP4-201ENST00000441206 465 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 AL591503.2-201ENST00000442314 1005 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 TAF9P1-201ENST00000445421 515 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC66A2RUB6 AC097463.1-201ENST00000447288 481 ntBASIC6.07□□□□□ -1.44
CCDC66A2RUB6 GEMIN2P1-201ENST00000454246 752 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms