Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC006466.1-201ENST00000438721 289 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AL772161.1-201ENST00000439130 476 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 MTND4LP2-201ENST00000502312 285 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC139783.2-201ENST00000504847 1145 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC007016.1-201ENST00000512110 244 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 OR7H2P-201ENST00000513483 306 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 MIR4270-201ENST00000581799 70 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC023762.1-201ENST00000603280 584 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AP001784.1-201ENST00000624107 428 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AC010928.1-201ENST00000592477 1447 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 IQCB2P-201ENST00000401788 1633 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 MFSD8-242ENST00000641690 4199 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HLA-DRB4X5D2U9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HLA-DRB4X5D2U9 AC011266.1-201ENST00000624119 3569 ntBASIC3.4□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DRB4X5D2U9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DRB4X5D2U9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC011155.1-201ENST00000316512 456 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 MIR365B-201ENST00000362317 111 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 RN7SKP103-201ENST00000363848 320 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC013268.2-201ENST00000420753 337 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 USP9YP9-201ENST00000429406 715 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AL359265.2-201ENST00000434367 631 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 RPSAP41-201ENST00000439695 860 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC105233.1-201ENST00000498840 781 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 PARP4P3-201ENST00000510265 317 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 RNA5SP497-201ENST00000516081 97 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC124068.1-201ENST00000563131 678 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 RN7SL690P-201ENST00000582087 240 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 MIR4480-201ENST00000582492 71 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC067838.1-201ENST00000606064 577 ntBASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DRB4X5D2U9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 KARSP3-201ENST00000571212 1504 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AC010300.1-201ENST00000600671 5134 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 RNA5SP22-201ENST00000365393 109 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 RNA5SP397-201ENST00000391323 118 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 OR1F12-201ENST00000402365 945 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 RNU2-50P-201ENST00000410494 143 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AL139128.1-201ENST00000413921 941 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 AL391219.1-201ENST00000422570 483 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 RPL21P91-201ENST00000429231 479 ntBASIC3.39□□□□□ -1.87
HLA-DRB4X5D2U9 RPL23AP25-201ENST00000430973 463 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms