Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MIR4298-201ENST00000584380 73 ntBASIC5.73□□□□□ -1.49
PHRF1Q9P1Y6 AL353726.1-201ENST00000614041 1000 ntBASIC5.73□□□□□ -1.49
PHRF1Q9P1Y6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.73□□□□□ -1.49
PHRF1Q9P1Y6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHRF1Q9P1Y6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.73□□□□□ -1.49
PHRF1Q9P1Y6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 RPS26P4-201ENST00000431743 355 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC091564.1-201ENST00000464563 479 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 OR5D2P-201ENST00000524390 911 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC124068.1-201ENST00000563131 678 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AL451086.1-201ENST00000605596 223 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC010608.2-201ENST00000624830 470 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AP002512.4-202ENST00000641599 4530 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AP001157.1-201ENST00000550837 2339 ntBASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHRF1Q9P1Y6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHRF1Q9P1Y6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHRF1Q9P1Y6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PHRF1Q9P1Y6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.71□□□□□ -1.49
PHRF1Q9P1Y6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.71□□□□□ -1.49
PHRF1Q9P1Y6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 RNA5SP372-201ENST00000390836 115 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 PEX12P1-201ENST00000400284 1048 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 ATP1B1P1-201ENST00000509767 915 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 RNU6-352P-201ENST00000516908 107 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 BNIP3P11-201ENST00000603878 563 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 AC090912.3-201ENST00000609775 533 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.71□□□□□ -1.5
PHRF1Q9P1Y6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 RNA5SP119-201ENST00000362715 117 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AL356968.2-201ENST00000412769 1257 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 SETP4-201ENST00000455717 868 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 IFITM8P-201ENST00000522529 394 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 MIR3944-201ENST00000581277 108 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AC116667.1-201ENST00000604855 2072 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 MIR449B-201ENST00000384995 97 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 U3.23-201ENST00000391132 200 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 UBTFL3-201ENST00000418934 1024 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AL157884.3-201ENST00000448273 1184 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 RPL36AP13-201ENST00000457490 317 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 snoU13.24-201ENST00000458998 104 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 ATP5G1P3-201ENST00000463301 410 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 UBTFL6-201ENST00000477929 1024 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 AC107982.3-201ENST00000584957 985 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 COX6CP4-201ENST00000605798 228 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 MIR8069-1-201ENST00000616627 86 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 MIR8069-2-201ENST00000621412 86 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 CR392039.5-201ENST00000623201 510 ntBASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHRF1Q9P1Y6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AL355596.1-201ENST00000565399 3996 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms