Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 RAD17P1-201ENST00000418130 2042 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 OR56B2P-202ENST00000641377 2453 ntBASIC4.4□□□□□ -1.7
TREX1Q9NSU2 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.7
TREX1Q9NSU2 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.7
TREX1Q9NSU2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TREX1Q9NSU2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AL139039.2-201ENST00000407436 479 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 RPS20P14-201ENST00000412545 360 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AL590139.1-201ENST00000416267 400 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AL358176.3-201ENST00000420757 454 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 FHP1-201ENST00000442741 703 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 ABCF2P2-201ENST00000450549 296 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AC021483.2-201ENST00000567415 758 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AP005119.2-201ENST00000579735 1105 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 AC004241.3-201ENST00000611728 517 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 SCN1A-220ENST00000641603 12506 ntBASIC4.4□□□□□ -1.71
TREX1Q9NSU2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
TREX1Q9NSU2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC008033.1-201ENST00000216407 1162 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 ATP5F1P2-201ENST00000398143 760 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC006065.1-201ENST00000422539 802 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 OR52Y1P-201ENST00000452418 828 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC079804.1-201ENST00000461922 436 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 RPL5P30-201ENST00000465511 891 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 RPS26P28-201ENST00000470806 348 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 EIF4EP5-201ENST00000528228 640 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC125612.1-201ENST00000547580 377 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 MTND6P33-201ENST00000571794 183 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AL353600.1-201ENST00000608148 251 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC012409.3-201ENST00000611343 981 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AP005019.3-201ENST00000620418 560 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC055839.1-201ENST00000634467 498 ntBASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.39□□□□□ -1.71
TREX1Q9NSU2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AL132640.2-201ENST00000559968 1698 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 RNU1-108P-201ENST00000362556 161 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms