Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AL513327.3-201ENST00000602618 469 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 WISP1-OT1-201ENST00000602893 642 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC018618.2-201ENST00000604770 446 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 VN1R74P-201ENST00000613259 503 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AP002505.2-201ENST00000623585 696 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 TTC39DP-201ENST00000416781 1688 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AP000776.1-201ENST00000530032 1663 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 MSL3P1-202ENST00000440028 1468 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RNU6-1283P-201ENST00000365314 105 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RNU4-2-201ENST00000365668 141 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RNU6-549P-201ENST00000384433 107 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 DEFB108C-201ENST00000400154 252 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RN7SKP142-201ENST00000411236 328 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 HMGB3P31-201ENST00000413333 595 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 KRT8P51-201ENST00000438938 274 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 BX679664.2-201ENST00000439282 283 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 VDAC2P4-201ENST00000452925 711 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AL035090.1-201ENST00000454835 332 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RPL12P39-201ENST00000455456 496 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 RPS23P2-201ENST00000463671 415 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 SETP11-201ENST00000473027 690 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 PDCL3P4-201ENST00000489621 720 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 CBX3P3-201ENST00000508108 532 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 OR51K1P-201ENST00000510214 950 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 CDC42P4-201ENST00000510507 563 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AL139174.1-201ENST00000531489 886 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 OR11J2P-201ENST00000555298 907 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC012435.1-202ENST00000568772 240 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 MTCO3P24-201ENST00000572729 782 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC011260.1-201ENST00000578420 472 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 U73023.1-201ENST00000603134 700 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC138749.5-201ENST00000611461 208 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 MIR4278-201ENST00000636094 69 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 AL355852.1-201ENST00000454081 1771 ntBASIC6.29□□□□□ -1.4
PDLIM7Q9NR12 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 RNA5SP305-201ENST00000362665 119 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 U3.4-201ENST00000363352 213 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 MTND4LP20-201ENST00000402379 270 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AL139421.1-201ENST00000423010 169 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 GTF2IP7-202ENST00000436677 309 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 PA2G4P6-201ENST00000438325 1197 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 RPL5P12-201ENST00000477071 851 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 BX284632.1-201ENST00000478218 541 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 GAPDHP36-201ENST00000480688 918 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 RPS7P6-201ENST00000485777 579 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AC109458.1-201ENST00000508858 316 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AC108120.2-201ENST00000512973 294 ntBASIC6.28□□□□□ -1.4
PDLIM7Q9NR12 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms