Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-114P-201ENST00000384704 105 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 PIGPP2-201ENST00000411569 458 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC245052.5-201ENST00000416320 649 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ATG4AP1-201ENST00000416893 538 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC093084.1-201ENST00000424233 687 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 USP9YP18-201ENST00000425912 695 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 MTND3P23-201ENST00000431980 347 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC112492.2-201ENST00000432774 1030 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC093716.1-201ENST00000435923 377 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 HMGB1P45-201ENST00000435986 653 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 DNAJC19P4-201ENST00000440115 345 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AL353093.1-201ENST00000441292 436 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 OR6C5P-201ENST00000452388 923 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 DNAJC19P1-201ENST00000455312 319 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC009963.3-201ENST00000458090 486 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC079080.1-201ENST00000479841 822 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 NPM1P21-201ENST00000513394 762 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 RNU6-506P-201ENST00000516553 94 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 Y_RNA.710-201ENST00000516975 110 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 MRPS21P8-201ENST00000569196 235 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AL390816.3-201ENST00000604527 1066 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC072046.2-201ENST00000618366 268 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AL161756.3-201ENST00000641216 2071 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC026523.2-201ENST00000625039 7739 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 OR10J6P-201ENST00000289731 930 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP453-201ENST00000362503 119 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RNU6-348P-201ENST00000384386 107 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL139805.1-201ENST00000407837 289 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 UBTFL3-201ENST00000418934 1024 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RPS15AP30-201ENST00000420976 390 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 MTND3P21-201ENST00000433774 331 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC094019.1-201ENST00000434678 472 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 PNKDP1-201ENST00000435914 430 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 TMX2P1-201ENST00000436507 708 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL512593.1-201ENST00000444758 779 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 COX6CP12-201ENST00000446748 202 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC068228.1-201ENST00000461723 211 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 UBTFL6-201ENST00000477929 1024 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RPS7P6-201ENST00000485777 579 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms