Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 MIR92B-201ENST00000607575 96 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC074140.1-201ENST00000621617 208 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC006065.6-201ENST00000625201 545 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 Z95327.2-201ENST00000414579 1873 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 ARAFP1-201ENST00000422172 605 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 CHIAP3-201ENST00000423668 1133 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 RPL23AP25-201ENST00000430973 463 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 EIF2S2P2-201ENST00000447161 982 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC012671.1-201ENST00000451912 203 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC093840.1-201ENST00000511599 336 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC026402.1-201ENST00000513642 170 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC100770.1-201ENST00000532310 322 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AL109766.1-201ENST00000555080 552 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC093227.2-201ENST00000589357 285 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AL353600.1-201ENST00000608148 251 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 OR7M1P-201ENST00000608946 533 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 DHX40P1-201ENST00000588725 1412 ntBASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF3BQ9BZI7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 SNRPFP1-201ENST00000414761 252 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 NPM1P26-201ENST00000426339 738 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 BMS1P19-201ENST00000433925 393 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC122718.1-201ENST00000439448 744 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 DDX39BP2-208ENST00000453923 258 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 RNU7-157P-201ENST00000459600 66 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 RPS27AP17-201ENST00000463344 455 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 FAM133DP-201ENST00000464802 691 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 RPL23AP65-201ENST00000475608 468 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC012158.1-204ENST00000483430 465 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AL008729.2-201ENST00000606393 473 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 Z98200.1-201ENST00000607298 470 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC007546.2-201ENST00000623996 360 ntBASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF3BQ9BZI7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AL132640.2-201ENST00000559968 1698 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 RNA5SP397-201ENST00000391323 118 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 RPL21P108-201ENST00000413857 481 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AL358176.3-201ENST00000420757 454 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC062016.2-201ENST00000420950 676 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 MIR6716-201ENST00000613413 80 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 MIR6891-201ENST00000618788 93 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC034229.5-201ENST00000624258 185 ntBASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms