Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 USP9YP2-201ENST00000504503 1000 ntBASIC6.56□□□□□ -1.36
SCAPERQ9BY12 KCTD9P2-201ENST00000512203 1013 ntBASIC6.56□□□□□ -1.36
SCAPERQ9BY12 USP9YP1-201ENST00000513521 1002 ntBASIC6.56□□□□□ -1.36
SCAPERQ9BY12 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.56□□□□□ -1.36
SCAPERQ9BY12 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.56□□□□□ -1.36
SCAPERQ9BY12 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.56□□□□□ -1.36
SCAPERQ9BY12 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.56□□□□□ -1.36
SCAPERQ9BY12 AL356121.2-201ENST00000624715 780 ntBASIC6.56□□□□□ -1.36
SCAPERQ9BY12 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCAPERQ9BY12 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC107068.1-201ENST00000563286 4218 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 RN7SKP182-201ENST00000410772 298 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 REREP1Y-201ENST00000422655 198 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 REREP2Y-201ENST00000439103 200 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 ATP1B1P1-201ENST00000509767 915 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC006499.6-201ENST00000511169 607 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 HSPE1P5-201ENST00000561489 272 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 CASC19-206ENST00000641028 1430 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 AC005261.6-201ENST00000623072 1387 ntBASIC6.55□□□□□ -1.36
SCAPERQ9BY12 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SCAPERQ9BY12 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 TCP1P3-201ENST00000414406 1498 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AL080315.1-201ENST00000406055 466 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AP000357.1-201ENST00000409926 1165 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 DPPA2P2-201ENST00000418220 897 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 MTCO1P54-201ENST00000430139 712 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AC006484.1-201ENST00000435086 1884 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 TRMT10BP1-201ENST00000519377 943 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AC130352.1-201ENST00000602979 661 ntBASIC6.54□□□□□ -1.36
SCAPERQ9BY12 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SCAPERQ9BY12 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 SNORA73.2-201ENST00000364946 201 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 SNORA9-201ENST00000384215 133 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC108032.1-201ENST00000416706 207 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC115285.1-201ENST00000424879 736 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC112230.1-201ENST00000604342 547 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC012468.1-201ENST00000604888 430 ntBASIC6.53□□□□□ -1.36
SCAPERQ9BY12 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SCAPERQ9BY12 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.52□□□□□ -1.36
SCAPERQ9BY12 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 MIR200C-201ENST00000384980 68 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 FCF1P5-201ENST00000406490 482 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 PPIAP13-201ENST00000434706 478 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 GTF3AP5-201ENST00000442645 697 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 RNA5SP246-201ENST00000458909 119 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 RNA5SP73-201ENST00000516744 108 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms