Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC023050.1-201ENST00000498198 304 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC010306.1-201ENST00000523223 1117 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 NTAN1P1-201ENST00000603150 646 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 RNF138P2-201ENST00000603490 592 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC126175.1-201ENST00000617041 758 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC136428.4-201ENST00000634254 1155 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC132825.7-201ENST00000638744 335 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 OR14L1P-202ENST00000641545 3009 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL592182.3-201ENST00000642132 3304 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 SNORA73.1-201ENST00000363107 205 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 OR52E6-202ENST00000379946 954 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC009804.1-201ENST00000400949 179 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 MTATP6P31-201ENST00000406985 692 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 RNU2-65P-201ENST00000410162 185 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC092745.2-202ENST00000411880 369 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 BX664727.1-201ENST00000416024 466 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL031736.2-201ENST00000426573 787 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 RPS7P5-201ENST00000441482 581 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 RHEBP2-201ENST00000450289 600 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC010350.1-201ENST00000504908 231 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC008565.1-201ENST00000509046 885 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AP003717.3-201ENST00000544832 1180 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC063949.1-201ENST00000552900 865 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 MIR3614-201ENST00000581261 86 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC090312.2-201ENST00000582687 378 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC009643.2-201ENST00000603543 1448 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC112503.2-201ENST00000609005 552 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 VN1R9P-201ENST00000614184 867 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC090527.3-201ENST00000619041 548 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AC138907.10-201ENST00000623708 983 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AP000720.1-201ENST00000625091 483 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL672167.1-203ENST00000641299 2975 ntBASIC4.76□□□□□ -1.65
VPS33AQ96AX1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS33AQ96AX1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 SAGE2P-201ENST00000420011 2126 ntBASIC4.75□□□□□ -1.65
VPS33AQ96AX1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS33AQ96AX1 AL035419.1-201ENST00000397037 564 ntBASIC4.75□□□□□ -1.65
VPS33AQ96AX1 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 318.6 ms