Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 RNA5SP284-201ENST00000384547 118 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL512430.2-201ENST00000406786 339 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 RAP1BP3-201ENST00000407180 549 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 MYL6P5-201ENST00000412707 459 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 MTND1P21-201ENST00000412991 285 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL354890.1-201ENST00000413730 346 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 MTCYBP38-201ENST00000417160 1123 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LARP1BP3-201ENST00000437229 869 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LDHAP2-201ENST00000437325 985 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 CACYBPP1-201ENST00000438592 684 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 COX6CP12-201ENST00000446748 202 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 EPS15P1-201ENST00000448836 336 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC079841.1-201ENST00000481228 950 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 SETP14-201ENST00000497538 873 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC104109.1-201ENST00000498563 436 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 RPL37P25-201ENST00000507308 276 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC108475.1-201ENST00000507880 950 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC008549.1-201ENST00000512900 643 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 OR6C7P-201ENST00000547875 934 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 DUX4L52-201ENST00000549363 777 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC112220.3-201ENST00000605502 502 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC116651.1-201ENST00000609724 556 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL139099.4-201ENST00000614802 114 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL356274.1-201ENST00000617064 410 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL445670.1-201ENST00000618889 801 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC012414.7-202ENST00000622705 1090 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC025048.6-202ENST00000627667 438 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL355480.1-201ENST00000629041 99 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC083837.1-201ENST00000565297 2994 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC110373.1-201ENST00000505994 3505 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RNU5D-1-201ENST00000363299 116 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-621P-201ENST00000364752 109 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RNU1-59P-201ENST00000364829 162 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 MIR16-1-201ENST00000385271 89 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL161909.1-201ENST00000397390 712 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 BX323845.3-201ENST00000428215 527 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL596276.1-201ENST00000434465 418 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC073109.1-201ENST00000445066 978 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RPL31P15-201ENST00000449770 338 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms