Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 MTND4P26-201ENST00000415971 1359 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC010132.2-201ENST00000295493 1043 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 U8.4-201ENST00000363626 134 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RHOT1P2-201ENST00000366423 333 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RNU6-171P-201ENST00000384354 107 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RN7SKP273-201ENST00000411392 314 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RPS23P10-201ENST00000416185 486 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 GAPDHP49-201ENST00000421421 961 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC007559.1-201ENST00000428736 355 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 PRELID3BP10-201ENST00000431957 584 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 TRY2P-201ENST00000448860 689 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC012671.1-201ENST00000451912 203 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 RNU2-30P-201ENST00000516209 141 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 IFITM8P-201ENST00000522529 394 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AP001880.2-201ENST00000538233 448 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC027281.1-201ENST00000574178 758 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 Z98200.1-201ENST00000607298 470 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AL031666.3-201ENST00000609320 1006 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AL121612.2-201ENST00000612261 482 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 MIR6886-201ENST00000619864 61 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 AL355480.1-201ENST00000629041 99 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 LINC00622-201ENST00000562811 1570 ntBASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.43□□□□□ -1.7
NUDCD3Q8IVD9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AL590763.1-201ENST00000398297 1545 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 BX005019.1-201ENST00000561881 1810 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 MIR93-201ENST00000385024 80 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 HMGB1P32-201ENST00000425971 565 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC073850.1-201ENST00000449243 255 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 FGF7P3-201ENST00000454645 303 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 RPS26P39-201ENST00000469206 341 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC007016.1-201ENST00000512110 244 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 NDUFB4P12-201ENST00000513465 390 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 RNA5SP92-201ENST00000516437 110 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 MTCYBP19-201ENST00000517463 1124 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC109635.6-201ENST00000525487 1113 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 PHBP17-201ENST00000528576 541 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC008033.2-201ENST00000542626 177 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC018552.3-201ENST00000567416 561 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 RPL23AP97-201ENST00000568955 471 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms