| ATG9A | Q7Z3C6 | Y_RNA.110-201 | ENST00000363220 | 99 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ARV1-202 | ENST00000366658 | 1170 nt | TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MIR921-201 | ENST00000401133 | 56 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC003659.1-201 | ENST00000424251 | 465 nt | TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC234779.1-201 | ENST00000425910 | 285 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC00446-202 | ENST00000438327 | 357 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ARL5AP3-201 | ENST00000439327 | 386 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC01150-201 | ENST00000455671 | 315 nt | TSL 1 (best) BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RN7SL98P-201 | ENST00000462271 | 300 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC026347.1-201 | ENST00000463255 | 474 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC108751.2-201 | ENST00000469993 | 231 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC098583.1-201 | ENST00000480875 | 255 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC093267.1-201 | ENST00000489176 | 961 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC008628.1-201 | ENST00000508663 | 265 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | SETP12-201 | ENST00000514068 | 805 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC078906.1-201 | ENST00000523602 | 798 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL355112.1-201 | ENST00000550309 | 1236 nt | TSL 1 (best) BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL121852.1-201 | ENST00000554665 | 430 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL355075.3-201 | ENST00000554678 | 492 nt | TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL136520.1-202 | ENST00000555494 | 763 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC026992.1-202 | ENST00000558454 | 421 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC090079.2-201 | ENST00000575289 | 768 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RN7SL435P-201 | ENST00000584418 | 282 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MIR3138-201 | ENST00000585238 | 82 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | SP2-AS1-204 | ENST00000585280 | 405 nt | TSL 3 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC007193.1-201 | ENST00000599645 | 448 nt | TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AP002360.3-201 | ENST00000607673 | 710 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AP000569.1-201 | ENST00000607953 | 591 nt | TSL 2 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MILR1-203 | ENST00000615220 | 1196 nt | APPRIS P3 TSL 2 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MLECP1-201 | ENST00000615893 | 709 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | STATH-208 | ENST00000615994 | 598 nt | APPRIS P1 TSL 1 (best) BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | OR10A6-202 | ENST00000623991 | 945 nt | APPRIS P1 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TMEM30CP-203 | ENST00000637814 | 1035 nt | BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | OR2M2-202 | ENST00000641211 | 1229 nt | APPRIS P1 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | OR2M2-203 | ENST00000641836 | 1151 nt | APPRIS P1 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TIPARP-205 | ENST00000486483 | 2150 nt | APPRIS P1 TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CTAGE5-208 | ENST00000553352 | 3441 nt | TSL 1 (best) BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC00504-201 | ENST00000505089 | 4672 nt | TSL 2 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CUL2-209 | ENST00000537177 | 4271 nt | TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RASGEF1B-207 | ENST00000509081 | 3016 nt | APPRIS ALT1 TSL 5 BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CRISP1-204 | ENST00000507853 | 1793 nt | TSL 1 (best) BASIC | 5.5 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | FAM26D-202 | ENST00000368597 | 1311 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | FILIP1-203 | ENST00000393004 | 7807 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AP1G1-207 | ENST00000564155 | 2723 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | DTNA-203 | ENST00000315456 | 1706 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | NADK2-203 | ENST00000397338 | 3614 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MIR365B-201 | ENST00000362317 | 111 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC098872.1-201 | ENST00000413304 | 543 nt | TSL 3 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AF064860.1-201 | ENST00000416555 | 544 nt | TSL 3 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | VN1R31P-201 | ENST00000417498 | 730 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL592494.1-201 | ENST00000437523 | 309 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RPS26P2-201 | ENST00000440331 | 348 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC01851-201 | ENST00000443419 | 637 nt | TSL 3 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MTND5P8-201 | ENST00000449817 | 1083 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TTTY23B-202 | ENST00000451467 | 512 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TTTY23-201 | ENST00000452889 | 512 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL356272.1-201 | ENST00000454538 | 832 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC01014-203 | ENST00000455307 | 548 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | LINC02066-201 | ENST00000492731 | 580 nt | TSL 4 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RN7SL810P-201 | ENST00000493031 | 276 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC105460.2-202 | ENST00000502936 | 825 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC083829.1-201 | ENST00000503756 | 657 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC108157.1-201 | ENST00000510511 | 539 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RNU6-319P-201 | ENST00000516025 | 108 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | NSMCE2-206 | ENST00000519010 | 848 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | NRG3-205 | ENST00000537893 | 1174 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC107032.2-201 | ENST00000551082 | 386 nt | TSL 3 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | KPNA2P3-201 | ENST00000584190 | 848 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ZNF66-203 | ENST00000594534 | 757 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL590392.1-201 | ENST00000604960 | 446 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC092902.2-219 | ENST00000608488 | 822 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CCL14-203 | ENST00000620991 | 426 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC006065.6-201 | ENST00000625201 | 545 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TEX41-256 | ENST00000626411 | 368 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | SATB1-AS1-243 | ENST00000627546 | 589 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AL359313.1-202 | ENST00000635073 | 544 nt | TSL 4 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | NFIB-211 | ENST00000606230 | 2311 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | VIP-201 | ENST00000367243 | 1581 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CACNB4-243 | ENST00000637217 | 8188 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC090017.1-201 | ENST00000548612 | 1779 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ZNF510-201 | ENST00000223428 | 5154 nt | APPRIS P1 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | DDHD2-202 | ENST00000517385 | 4113 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | RBMS3-202 | ENST00000383766 | 2757 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CYP7A1-201 | ENST00000301645 | 2950 nt | APPRIS P1 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ECM2-202 | ENST00000375540 | 1606 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | EFCAB5-201 | ENST00000394835 | 5132 nt | APPRIS P2 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | BICRAL-201 | ENST00000314073 | 6530 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | COPG2-201 | ENST00000330992 | 3073 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC079915.1-201 | ENST00000584382 | 2780 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | MYB-226 | ENST00000528774 | 2277 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | PPP2R2A-201 | ENST00000315985 | 1878 nt | APPRIS ALT1 TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | NCOA7-202 | ENST00000368357 | 5521 nt | APPRIS P3 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CD96-203 | ENST00000438817 | 1565 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | ZNF616-204 | ENST00000600228 | 4335 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | HERC1-201 | ENST00000443617 | 15137 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | BTBD10P1-201 | ENST00000549824 | 1352 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TRAV36DV7-201 | ENST00000390463 | 356 nt | APPRIS P1 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | AC003035.1-201 | ENST00000391359 | 544 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | CDKN3-203 | ENST00000395577 | 637 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| ATG9A | Q7Z3C6 | TRIM60P17-201 | ENST00000415181 | 719 nt | BASIC | 5.48 | □□□□□ -1.53 | | |