Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 MTCO1P45-201ENST00000431457 267 ntBASIC3.88□□□□□ -1.79
USF2Q15853 RPS27P18-201ENST00000431701 247 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.88□□□□□ -1.79
USF2Q15853 CFL1P1-202ENST00000432948 411 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL392003.1-201ENST00000434394 243 ntBASIC3.88□□□□□ -1.79
USF2Q15853 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USF2Q15853 AL031663.1-201ENST00000437445 219 ntBASIC3.88□□□□□ -1.79
USF2Q15853 RPS26P2-201ENST00000440331 348 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL451050.1-201ENST00000450126 415 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL691482.1-201ENST00000453255 87 ntBASIC3.88□□□□□ -1.79
USF2Q15853 RPS4XP1-201ENST00000482189 787 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.88□□□□□ -1.79
USF2Q15853 RNA5SP392-201ENST00000516905 112 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.88□□□□□ -1.79
USF2Q15853 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.88□□□□□ -1.79
USF2Q15853 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.88□□□□□ -1.79
USF2Q15853 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.88□□□□□ -1.79
USF2Q15853 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.88□□□□□ -1.79
USF2Q15853 AL049830.4-201ENST00000555149 351 ntBASIC3.88□□□□□ -1.79
USF2Q15853 CYCSP40-201ENST00000575927 294 ntBASIC3.88□□□□□ -1.79
USF2Q15853 NPM1P45-201ENST00000583151 559 ntBASIC3.88□□□□□ -1.79
USF2Q15853 OR1AB1P-201ENST00000585564 761 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 AL139395.1-201ENST00000603662 160 ntBASIC3.88□□□□□ -1.79
USF2Q15853 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 AC022467.1-201ENST00000614738 749 ntBASIC3.88□□□□□ -1.79
USF2Q15853 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.88□□□□□ -1.79
USF2Q15853 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 AC068446.1-201ENST00000556425 1549 ntBASIC3.88□□□□□ -1.79
USF2Q15853 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
USF2Q15853 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USF2Q15853 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.88□□□□□ -1.79
USF2Q15853 AC016588.2-201ENST00000632484 3021 ntBASIC3.88□□□□□ -1.79
USF2Q15853 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.88□□□□□ -1.79
USF2Q15853 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
USF2Q15853 IQCB2P-201ENST00000401788 1633 ntBASIC3.88□□□□□ -1.79
USF2Q15853 AL031985.3-201ENST00000565390 2449 ntBASIC3.87□□□□□ -1.79
USF2Q15853 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 RARSP1-201ENST00000542842 1418 ntBASIC3.87□□□□□ -1.79
USF2Q15853 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
USF2Q15853 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
USF2Q15853 AC008725.1-201ENST00000605123 2263 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL353743.4-201ENST00000422653 1547 ntBASIC3.87□□□□□ -1.79
USF2Q15853 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 RNU6-386P-201ENST00000362650 107 ntBASIC3.87□□□□□ -1.79
USF2Q15853 SNORA17.1-201ENST00000362945 126 ntBASIC3.87□□□□□ -1.79
USF2Q15853 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.87□□□□□ -1.79
USF2Q15853 SNORA70.10-201ENST00000384515 134 ntBASIC3.87□□□□□ -1.79
USF2Q15853 LRRC37BP1-201ENST00000398851 714 ntBASIC3.87□□□□□ -1.79
USF2Q15853 GLULP6-201ENST00000399502 913 ntBASIC3.87□□□□□ -1.79
USF2Q15853 DUTP5-201ENST00000406790 469 ntBASIC3.87□□□□□ -1.79
USF2Q15853 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
USF2Q15853 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
USF2Q15853 AC004448.2-201ENST00000422360 586 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 ELOCP6-201ENST00000429066 328 ntBASIC3.87□□□□□ -1.79
USF2Q15853 NANOGP6-201ENST00000429190 847 ntBASIC3.87□□□□□ -1.79
USF2Q15853 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 NMNAT1P2-201ENST00000435192 860 ntBASIC3.87□□□□□ -1.79
USF2Q15853 CBX1P4-201ENST00000439415 457 ntBASIC3.87□□□□□ -1.79
USF2Q15853 RPS29P9-201ENST00000440360 171 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL450023.3-201ENST00000440592 271 ntBASIC3.87□□□□□ -1.79
USF2Q15853 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL353898.1-201ENST00000444055 238 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 VN1R48P-201ENST00000448149 1036 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.87□□□□□ -1.79
USF2Q15853 FABP3P2-201ENST00000453169 399 ntBASIC3.87□□□□□ -1.79
USF2Q15853 ELOCP12-201ENST00000458706 328 ntBASIC3.87□□□□□ -1.79
USF2Q15853 RPL7P48-201ENST00000461513 746 ntBASIC3.87□□□□□ -1.79
USF2Q15853 RPL9P32-201ENST00000464118 620 ntBASIC3.87□□□□□ -1.79
USF2Q15853 OR2AO1P-201ENST00000476497 403 ntBASIC3.87□□□□□ -1.79
USF2Q15853 RPL7P39-201ENST00000481157 744 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.87□□□□□ -1.79
USF2Q15853 AC010350.1-201ENST00000504908 231 ntBASIC3.87□□□□□ -1.79
USF2Q15853 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.87□□□□□ -1.79
USF2Q15853 AC034244.2-201ENST00000514668 858 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 AC012339.2-201ENST00000523996 453 ntBASIC3.87□□□□□ -1.79
USF2Q15853 OR4A46P-201ENST00000527255 933 ntBASIC3.87□□□□□ -1.79
USF2Q15853 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 AC005868.1-201ENST00000536421 331 ntBASIC3.87□□□□□ -1.79
USF2Q15853 TOMM20P2-201ENST00000540082 421 ntBASIC3.87□□□□□ -1.79
USF2Q15853 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
USF2Q15853 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.87□□□□□ -1.79
USF2Q15853 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.87□□□□□ -1.79
USF2Q15853 ATP5J2P6-201ENST00000565203 266 ntBASIC3.87□□□□□ -1.79
USF2Q15853 MIR4644-201ENST00000579929 84 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 AC115621.1-201ENST00000604653 858 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC090525.3-201ENST00000605601 189 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms