Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPAQ06546 TOMM20P2-201ENST00000540082 421 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC090515.3-201ENST00000560431 315 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPAQ06546 AC011477.5-201ENST00000586571 259 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC103792.1-201ENST00000603591 919 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 AC140479.6-201ENST00000633535 357 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.2□□□□□ -1.58
GABPAQ06546 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.2□□□□□ -1.58
GABPAQ06546 DDX18P6-201ENST00000450119 1997 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.2□□□□□ -1.58
GABPAQ06546 NXPH1-205ENST00000602349 1953 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.19□□□□□ -1.58
GABPAQ06546 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GABPAQ06546 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GABPAQ06546 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.19□□□□□ -1.58
GABPAQ06546 RNU1-63P-201ENST00000383902 164 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
GABPAQ06546 AL583835.1-201ENST00000399570 407 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 NRBF2P2-201ENST00000413087 861 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.19□□□□□ -1.58
GABPAQ06546 RPS26P2-201ENST00000440331 348 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.19□□□□□ -1.58
GABPAQ06546 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.19□□□□□ -1.58
GABPAQ06546 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.19□□□□□ -1.58
GABPAQ06546 AC105137.1-201ENST00000484355 562 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GABPAQ06546 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.19□□□□□ -1.58
GABPAQ06546 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.19□□□□□ -1.58
GABPAQ06546 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.19□□□□□ -1.58
GABPAQ06546 AL121839.1-201ENST00000556233 1185 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 MIR3160-1-201ENST00000577972 85 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.19□□□□□ -1.58
GABPAQ06546 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GABPAQ06546 RNF138P2-201ENST00000603490 592 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
GABPAQ06546 AL139254.3-201ENST00000641097 674 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 AC006484.1-201ENST00000435086 1884 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 AL158163.1-201ENST00000603915 1649 ntBASIC5.19□□□□□ -1.58
GABPAQ06546 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.19□□□□□ -1.58
GABPAQ06546 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 AL592182.3-201ENST00000642132 3304 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.18□□□□□ -1.58
GABPAQ06546 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GABPAQ06546 RNA5SP479-201ENST00000364858 117 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GABPAQ06546 AMZ2P2-201ENST00000406819 1057 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 SNORA74C-2-201ENST00000411179 201 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.18□□□□□ -1.58
GABPAQ06546 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 AC062016.2-201ENST00000420950 676 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.18□□□□□ -1.58
GABPAQ06546 CDY14P-201ENST00000431260 1014 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.18□□□□□ -1.58
GABPAQ06546 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.18□□□□□ -1.58
GABPAQ06546 CDY12P-201ENST00000440679 1015 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.18□□□□□ -1.58
GABPAQ06546 CDY13P-201ENST00000445813 1015 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 CDY23P-201ENST00000451661 1014 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.18□□□□□ -1.58
GABPAQ06546 SEPT7P3-201ENST00000455017 621 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 RPL23AP37-201ENST00000479658 549 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.18□□□□□ -1.58
GABPAQ06546 NPM1P6-201ENST00000521088 871 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.18□□□□□ -1.58
GABPAQ06546 LSM3P2-201ENST00000551246 273 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 FAM60CP-201ENST00000591086 664 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 HMGB2P1-201ENST00000591146 634 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AC010201.1-201ENST00000605051 540 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 ARF4P1-201ENST00000605447 541 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 AC091979.2-201ENST00000607514 214 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.18□□□□□ -1.58
GABPAQ06546 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.18□□□□□ -1.58
GABPAQ06546 AP003497.2-201ENST00000624220 967 ntBASIC5.18□□□□□ -1.58
GABPAQ06546 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.18□□□□□ -1.58
GABPAQ06546 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GABPAQ06546 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
GABPAQ06546 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms