Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCNA1P78396 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCNA1P78396 AL023881.1-201ENST00000621088 301 ntBASIC5.22□□□□□ -1.57
CCNA1P78396 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCNA1P78396 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCNA1P78396 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
CCNA1P78396 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCNA1P78396 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.21□□□□□ -1.57
CCNA1P78396 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.21□□□□□ -1.57
CCNA1P78396 AC093591.2-201ENST00000565254 3843 ntBASIC5.21□□□□□ -1.57
CCNA1P78396 AC104118.1-201ENST00000607625 1589 ntBASIC5.21□□□□□ -1.57
CCNA1P78396 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCNA1P78396 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CCNA1P78396 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNA1P78396 OR5P1P-201ENST00000299512 925 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 AL121657.1-201ENST00000327215 531 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 RNU1-94P-201ENST00000362627 173 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 RNA5SP366-201ENST00000365454 123 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCNA1P78396 RN7SKP247-201ENST00000411094 308 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 RPL7P57-201ENST00000423238 740 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 HSPE1P16-201ENST00000426640 348 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 AL158073.1-201ENST00000426848 1104 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 AP001324.1-201ENST00000428553 399 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 AP000936.3-201ENST00000438127 255 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNA1P78396 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCNA1P78396 AC099063.2-201ENST00000446360 662 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNA1P78396 HAUS1P1-201ENST00000505275 832 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.21□□□□□ -1.58
CCNA1P78396 AP003730.1-201ENST00000524605 285 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNA1P78396 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNA1P78396 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNA1P78396 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNA1P78396 MIR3653-201ENST00000625572 110 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCNA1P78396 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCNA1P78396 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCNA1P78396 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.21□□□□□ -1.58
CCNA1P78396 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCNA1P78396 AL445487.1-201ENST00000415694 1580 ntBASIC5.21□□□□□ -1.58
CCNA1P78396 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNA1P78396 AL391684.1-202ENST00000641293 1636 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 ATP5F1P2-201ENST00000398143 760 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AL512430.2-201ENST00000406786 339 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNA1P78396 RPS3AP54-201ENST00000435535 734 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AC122718.1-201ENST00000439448 744 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 CDC27P1-201ENST00000445384 715 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 FAM133DP-201ENST00000464802 691 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AC053481.1-201ENST00000467217 306 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AP001960.1-201ENST00000506494 658 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNA1P78396 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNA1P78396 AC109635.6-201ENST00000525487 1113 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNA1P78396 AC107918.3-201ENST00000533272 382 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 AC025884.1-201ENST00000556034 378 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 FAM106CP-201ENST00000582212 507 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.2□□□□□ -1.58
CCNA1P78396 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CCNA1P78396 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNA1P78396 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
CCNA1P78396 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNA1P78396 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CCNA1P78396 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCNA1P78396 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNA1P78396 DDX18P3-201ENST00000404856 2007 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 ADAM5-202ENST00000399789 1942 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 AC005261.4-201ENST00000600047 1385 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNA1P78396 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCNA1P78396 OR10AB1P-202ENST00000641219 1686 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCNA1P78396 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 AL035551.1-201ENST00000446931 348 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 AL935212.3-201ENST00000450729 284 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 RPS27AP16-201ENST00000492222 470 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 SLC25A15P5-201ENST00000508033 253 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 HMGB1P23-201ENST00000518743 568 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNA1P78396 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNA1P78396 AC068993.1-201ENST00000546724 589 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 SETP1-201ENST00000556014 845 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNA1P78396 AP005262.1-201ENST00000582646 997 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms