Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC100770.1-201ENST00000532310 322 ntBASIC3.91□□□□□ -1.78
HIST1H3AP68431 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 DHX40P1-201ENST00000588725 1412 ntBASIC3.91□□□□□ -1.78
HIST1H3AP68431 AC007546.2-201ENST00000623996 360 ntBASIC3.91□□□□□ -1.78
HIST1H3AP68431 AC067931.1-201ENST00000624190 671 ntBASIC3.91□□□□□ -1.78
HIST1H3AP68431 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H3AP68431 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H3AP68431 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H3AP68431 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H3AP68431 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H3AP68431 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H3AP68431 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.9□□□□□ -1.78
HIST1H3AP68431 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.9□□□□□ -1.78
HIST1H3AP68431 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC079741.1-201ENST00000321498 212 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC093719.1-202ENST00000392735 373 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 RBMY2KP-201ENST00000418221 992 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC053481.1-201ENST00000467217 306 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC115286.1-201ENST00000604298 434 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC015813.4-201ENST00000610469 179 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC100847.1-201ENST00000611316 481 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AL133243.1-201ENST00000614487 366 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AC021106.3-201ENST00000623925 531 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AP001784.1-201ENST00000624107 428 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 AL356121.2-201ENST00000624715 780 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 LINC01808-202ENST00000641680 1116 ntBASIC3.9□□□□□ -1.79
HIST1H3AP68431 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H3AP68431 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H3AP68431 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H3AP68431 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H3AP68431 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H3AP68431 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 OR4K15-201ENST00000305051 1216 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H3AP68431 MIR365B-201ENST00000362317 111 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 GCNT6-201ENST00000379591 934 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 GLULP6-201ENST00000399502 913 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 RNU2-50P-201ENST00000410494 143 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 RPS12P5-201ENST00000423449 371 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 IPMKP1-201ENST00000425988 855 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 NPM1P26-201ENST00000426339 738 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 RPS12P10-201ENST00000427031 377 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 RPS26P47-201ENST00000427219 348 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 UBE2V1P3-201ENST00000439651 417 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC114495.1-201ENST00000441274 436 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 RPL35AP28-201ENST00000459730 331 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 RNA5SP497-201ENST00000516081 97 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC051619.2-201ENST00000559063 397 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC008782.1-201ENST00000603386 430 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC015849.6-201ENST00000605454 474 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC024940.4-201ENST00000605507 246 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 AL161616.1-201ENST00000611867 286 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 AC006065.6-201ENST00000625201 545 ntBASIC3.89□□□□□ -1.79
HIST1H3AP68431 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
HIST1H3AP68431 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms