Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CKS1BP61024 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CKS1BP61024 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CKS1BP61024 AC138393.1-206ENST00000540997 1886 ntBASIC3.28□□□□□ -1.88
CKS1BP61024 AC017002.4-201ENST00000604721 1525 ntBASIC3.28□□□□□ -1.88
CKS1BP61024 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 AC110792.3-201ENST00000595906 1614 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC011493.1-201ENST00000596753 1632 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 RNF19BPY-201ENST00000458209 1550 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 SNORA17.1-201ENST00000362945 126 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 RNU1-83P-201ENST00000363426 164 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 CXADRP1-201ENST00000398098 1095 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AL080315.1-201ENST00000406055 466 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.27□□□□□ -1.89
CKS1BP61024 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 RPL7L1P9-201ENST00000431298 745 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AL451139.1-201ENST00000434718 346 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 OR7E125P-201ENST00000443450 846 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 PSMC1P13-201ENST00000458195 985 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC078785.3-201ENST00000476607 425 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC012158.1-204ENST00000483430 465 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 HAUS1P1-201ENST00000505275 832 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 IFITM8P-201ENST00000522529 394 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.27□□□□□ -1.89
CKS1BP61024 MIR5047-201ENST00000579212 100 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC095055.1-201ENST00000603472 1113 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC115621.1-201ENST00000604653 858 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 AC010680.4-201ENST00000605334 543 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 CXADRP3-202ENST00000617265 1100 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CKS1BP61024 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC000367.1-201ENST00000452711 1766 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.27□□□□□ -1.89
CKS1BP61024 AC025125.1-201ENST00000624743 1922 ntBASIC3.27□□□□□ -1.89
CKS1BP61024 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CKS1BP61024 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CKS1BP61024 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 AP001002.1-201ENST00000625148 1513 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CKS1BP61024 RNA5SP322-201ENST00000363617 119 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 RNU1-89P-201ENST00000384592 164 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CKS1BP61024 ATP5HP3-201ENST00000396994 486 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 RN7SKP293-201ENST00000411389 296 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC009237.5-201ENST00000414271 501 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 DDX39BP1-205ENST00000422507 192 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 RGS17P1-201ENST00000423358 553 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC108075.1-201ENST00000424692 529 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC079807.1-201ENST00000429993 481 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 CFTRP1-201ENST00000456646 183 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 RPL23AP65-201ENST00000475608 468 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.26□□□□□ -1.89
CKS1BP61024 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.26□□□□□ -1.89
CKS1BP61024 AC026688.1-201ENST00000520639 1168 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CKS1BP61024 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms