Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SNORA70.4-201ENST00000365509 134 ntBASIC5.09□□□□□ -1.59
VCPP55072 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.09□□□□□ -1.59
VCPP55072 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VCPP55072 AL357515.1-201ENST00000402967 542 ntBASIC5.09□□□□□ -1.59
VCPP55072 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
VCPP55072 EIF4HP2-201ENST00000424380 563 ntBASIC5.09□□□□□ -1.59
VCPP55072 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.09□□□□□ -1.59
VCPP55072 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.09□□□□□ -1.59
VCPP55072 Z95152.1-201ENST00000453556 656 ntBASIC5.09□□□□□ -1.59
VCPP55072 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.09□□□□□ -1.59
VCPP55072 RN7SL809P-201ENST00000482040 297 ntBASIC5.09□□□□□ -1.59
VCPP55072 AC116562.1-201ENST00000485355 781 ntBASIC5.09□□□□□ -1.59
VCPP55072 NIP7P2-201ENST00000485801 544 ntBASIC5.09□□□□□ -1.59
VCPP55072 SAP18P1-201ENST00000512058 390 ntBASIC5.09□□□□□ -1.59
VCPP55072 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.09□□□□□ -1.59
VCPP55072 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.09□□□□□ -1.59
VCPP55072 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.09□□□□□ -1.59
VCPP55072 ZYXP1-201ENST00000617638 118 ntBASIC5.09□□□□□ -1.59
VCPP55072 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VCPP55072 DHX9P1-201ENST00000436565 3076 ntBASIC5.09□□□□□ -1.6
VCPP55072 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.09□□□□□ -1.6
VCPP55072 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VCPP55072 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VCPP55072 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.6
VCPP55072 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.09□□□□□ -1.6
VCPP55072 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 AL136131.1-201ENST00000406079 803 ntBASIC5.08□□□□□ -1.6
VCPP55072 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.08□□□□□ -1.6
VCPP55072 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 RPL36AP36-201ENST00000418616 301 ntBASIC5.08□□□□□ -1.6
VCPP55072 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.08□□□□□ -1.6
VCPP55072 RGS17P1-201ENST00000423358 553 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 AC022431.1-201ENST00000450941 438 ntBASIC5.08□□□□□ -1.6
VCPP55072 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.08□□□□□ -1.6
VCPP55072 AC011276.1-201ENST00000469688 323 ntBASIC5.08□□□□□ -1.6
VCPP55072 BTG4P1-201ENST00000510421 183 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.08□□□□□ -1.6
VCPP55072 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.08□□□□□ -1.6
VCPP55072 MTATP6P25-201ENST00000574491 261 ntBASIC5.08□□□□□ -1.6
VCPP55072 AP005119.2-201ENST00000579735 1105 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 AC138473.1-201ENST00000605717 526 ntBASIC5.08□□□□□ -1.6
VCPP55072 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 AL022401.1-201ENST00000619498 108 ntBASIC5.08□□□□□ -1.6
VCPP55072 AC034229.5-201ENST00000624258 185 ntBASIC5.08□□□□□ -1.6
VCPP55072 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.08□□□□□ -1.6
VCPP55072 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VCPP55072 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCPP55072 AL034370.1-201ENST00000397254 1590 ntBASIC5.08□□□□□ -1.6
VCPP55072 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VCPP55072 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VCPP55072 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.07□□□□□ -1.6
VCPP55072 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.07□□□□□ -1.6
VCPP55072 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 AP000580.1-201ENST00000404439 358 ntBASIC5.07□□□□□ -1.6
VCPP55072 AL512430.2-201ENST00000406786 339 ntBASIC5.07□□□□□ -1.6
VCPP55072 RSU1P3-201ENST00000412878 835 ntBASIC5.07□□□□□ -1.6
VCPP55072 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.07□□□□□ -1.6
VCPP55072 CEACAMP8-201ENST00000413902 580 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.07□□□□□ -1.6
VCPP55072 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.07□□□□□ -1.6
VCPP55072 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 RNU6-775P-201ENST00000459318 96 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC037198.2-201ENST00000478845 733 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC073358.1-201ENST00000505671 684 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC147055.1-201ENST00000509261 750 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms