Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSH6P52701 MAPK10-349ENST00000641767 3661 ntBASIC6.12□□□□□ -1.43
MSH6P52701 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MSH6P52701 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH6P52701 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
MSH6P52701 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MSH6P52701 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MSH6P52701 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 RPL6P29-201ENST00000414863 865 ntBASIC6.11□□□□□ -1.43
MSH6P52701 RPL6P21-201ENST00000418672 846 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC114814.2-201ENST00000419195 485 ntBASIC6.11□□□□□ -1.43
MSH6P52701 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH6P52701 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.11□□□□□ -1.43
MSH6P52701 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC007688.1-201ENST00000475592 759 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.11□□□□□ -1.43
MSH6P52701 AC093014.1-201ENST00000548926 724 ntBASIC6.11□□□□□ -1.43
MSH6P52701 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH6P52701 CYCSP40-201ENST00000575927 294 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC025175.1-201ENST00000606482 759 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 FAM27D1-201ENST00000612308 341 ntBASIC6.11□□□□□ -1.43
MSH6P52701 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC138965.3-201ENST00000623875 498 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC010608.2-201ENST00000624830 470 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.11□□□□□ -1.43
MSH6P52701 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH6P52701 AL133243.3-201ENST00000617415 3004 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AC006042.3-201ENST00000454684 1469 ntBASIC6.11□□□□□ -1.43
MSH6P52701 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH6P52701 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH6P52701 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MSH6P52701 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.1□□□□□ -1.43
MSH6P52701 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MSH6P52701 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.1□□□□□ -1.43
MSH6P52701 AC012671.1-201ENST00000451912 203 ntBASIC6.1□□□□□ -1.43
MSH6P52701 RPL7P15-201ENST00000461190 712 ntBASIC6.1□□□□□ -1.43
MSH6P52701 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.1□□□□□ -1.43
MSH6P52701 AC099522.1-202ENST00000514718 367 ntBASIC6.1□□□□□ -1.43
MSH6P52701 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.1□□□□□ -1.43
MSH6P52701 RNA5SP519-201ENST00000516480 119 ntBASIC6.1□□□□□ -1.43
MSH6P52701 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.1□□□□□ -1.43
MSH6P52701 SRGNP1-201ENST00000603392 451 ntBASIC6.1□□□□□ -1.43
MSH6P52701 AC096553.1-201ENST00000605169 829 ntBASIC6.1□□□□□ -1.43
MSH6P52701 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.1□□□□□ -1.43
MSH6P52701 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MSH6P52701 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.1□□□□□ -1.43
MSH6P52701 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
MSH6P52701 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MSH6P52701 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.1□□□□□ -1.43
MSH6P52701 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MSH6P52701 THAP12P5-201ENST00000405864 2275 ntBASIC6.1□□□□□ -1.43
MSH6P52701 AL034370.1-201ENST00000397254 1590 ntBASIC6.1□□□□□ -1.43
MSH6P52701 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MSH6P52701 DDX18P5-201ENST00000534547 1306 ntBASIC6.09□□□□□ -1.43
MSH6P52701 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MSH6P52701 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MSH6P52701 MIR491-201ENST00000384877 84 ntBASIC6.09□□□□□ -1.43
MSH6P52701 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.09□□□□□ -1.43
MSH6P52701 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.09□□□□□ -1.43
MSH6P52701 AC114495.1-201ENST00000441274 436 ntBASIC6.09□□□□□ -1.43
MSH6P52701 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.09□□□□□ -1.43
MSH6P52701 AL157884.3-201ENST00000448273 1184 ntBASIC6.09□□□□□ -1.43
MSH6P52701 RHEBP2-201ENST00000450289 600 ntBASIC6.09□□□□□ -1.43
MSH6P52701 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.09□□□□□ -1.43
MSH6P52701 AL592156.1-201ENST00000508758 304 ntBASIC6.09□□□□□ -1.43
MSH6P52701 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.09□□□□□ -1.43
MSH6P52701 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.09□□□□□ -1.43
MSH6P52701 AC107982.3-201ENST00000584957 985 ntBASIC6.09□□□□□ -1.43
MSH6P52701 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.09□□□□□ -1.43
MSH6P52701 AC010487.1-201ENST00000594408 1172 ntBASIC6.09□□□□□ -1.43
MSH6P52701 AL121839.2-201ENST00000565058 6943 ntBASIC6.09□□□□□ -1.43
MSH6P52701 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.09□□□□□ -1.43
MSH6P52701 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.09□□□□□ -1.43
MSH6P52701 MUC2-202ENST00000613187 4845 ntBASIC6.09□□□□□ -1.43
MSH6P52701 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MSH6P52701 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
MSH6P52701 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MSH6P52701 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.08□□□□□ -1.44
MSH6P52701 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.08□□□□□ -1.44
MSH6P52701 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.08□□□□□ -1.44
MSH6P52701 RNU1-14P-201ENST00000362759 152 ntBASIC6.08□□□□□ -1.44
MSH6P52701 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
MSH6P52701 AP000357.1-201ENST00000409926 1165 ntBASIC6.08□□□□□ -1.44
MSH6P52701 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.08□□□□□ -1.44
MSH6P52701 CKS1BP6-201ENST00000424932 240 ntBASIC6.08□□□□□ -1.44
MSH6P52701 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.08□□□□□ -1.44
MSH6P52701 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.08□□□□□ -1.44
MSH6P52701 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.08□□□□□ -1.44
MSH6P52701 AC110768.1-201ENST00000509222 400 ntBASIC6.08□□□□□ -1.44
MSH6P52701 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.08□□□□□ -1.44
MSH6P52701 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.08□□□□□ -1.44
MSH6P52701 BPIFA4P-203ENST00000603168 689 ntBASIC6.08□□□□□ -1.44
MSH6P52701 OR8G7P-201ENST00000616658 848 ntBASIC6.08□□□□□ -1.44
MSH6P52701 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms