Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC004980.4-201ENST00000513375 203 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 SNORA31.13-201ENST00000516624 135 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 IGKV2-36-201ENST00000519999 223 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC012339.2-201ENST00000523996 453 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC019227.1-201ENST00000526902 510 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC004923.2-201ENST00000529649 369 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC105254.2-201ENST00000603636 436 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC016769.4-201ENST00000616893 535 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.83□□□□□ -1.64
HNF4AP41235 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
HNF4AP41235 THAP12P4-201ENST00000528321 2266 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 AC068446.1-201ENST00000556425 1549 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 MAPK10-349ENST00000641767 3661 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 OR6K3-202ENST00000368146 996 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 MIR765-201ENST00000390226 114 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 Z68694.1-201ENST00000413929 841 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 BMS1P13-201ENST00000417301 885 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 QRSL1P2-201ENST00000418582 964 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 ZFAND6P1-201ENST00000434138 605 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL162388.1-201ENST00000450912 352 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 IGHV5-78-201ENST00000450948 295 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AL691482.1-201ENST00000453255 87 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 RN7SL214P-201ENST00000487317 265 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 RN7SL244P-201ENST00000493405 297 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 MTND3P3-201ENST00000505004 126 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC093763.2-201ENST00000505334 1223 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 COX6B1P5-201ENST00000509843 249 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 OR4A2P-201ENST00000527276 913 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 OR7E128P-201ENST00000532736 1024 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.82□□□□□ -1.64
HNF4AP41235 OR4U1P-201ENST00000554958 912 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL121594.4-201ENST00000556211 1196 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.82□□□□□ -1.64
HNF4AP41235 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.82□□□□□ -1.64
HNF4AP41235 AL445222.1-201ENST00000607259 628 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 LINC01739-205ENST00000641890 573 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 AC126323.6-202ENST00000568092 3511 ntBASIC4.82□□□□□ -1.64
HNF4AP41235 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HNF4AP41235 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.82□□□□□ -1.64
HNF4AP41235 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HNF4AP41235 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.81□□□□□ -1.64
HNF4AP41235 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.81□□□□□ -1.64
HNF4AP41235 AC009951.1-201ENST00000623674 2614 ntBASIC4.81□□□□□ -1.64
HNF4AP41235 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HNF4AP41235 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.81□□□□□ -1.64
HNF4AP41235 MTND4P21-201ENST00000453886 1357 ntBASIC4.81□□□□□ -1.64
HNF4AP41235 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
HNF4AP41235 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.81□□□□□ -1.64
HNF4AP41235 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HNF4AP41235 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.81□□□□□ -1.64
HNF4AP41235 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms