Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 MAPK10-320ENST00000641462 6696 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HMGCLP35914 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCLP35914 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 RNU6-697P-201ENST00000363348 107 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 RNU6-1263P-201ENST00000384601 106 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 RPS3AP23-201ENST00000401762 784 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 FCF1P5-201ENST00000406490 482 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 RPS16P5-201ENST00000406501 404 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 VDAC1P9-201ENST00000412766 841 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 HMGB3P10-201ENST00000434734 572 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AL357520.1-201ENST00000441557 453 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC011753.3-201ENST00000443436 406 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCLP35914 RPL10P17-201ENST00000453852 316 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 AC007686.1-201ENST00000488511 463 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCLP35914 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCLP35914 TCP11X3P-202ENST00000514289 1254 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AP001781.1-201ENST00000530977 207 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGCLP35914 AC027281.1-201ENST00000574178 758 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC091178.1-203ENST00000584586 279 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 BPIFA4P-203ENST00000603168 689 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC008966.2-201ENST00000606157 453 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 AC073342.3-201ENST00000624211 193 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 LINC00622-201ENST00000562811 1570 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HMGCLP35914 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGCLP35914 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCLP35914 CPHL1P-201ENST00000461341 3407 ntBASIC4.55□□□□□ -1.68
HMGCLP35914 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 MIR192-201ENST00000384915 110 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 CYB5AP4-201ENST00000396692 399 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 ATP5F1P2-201ENST00000398143 760 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 NCSTNP1-201ENST00000406229 144 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC098592.2-201ENST00000413158 265 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC119751.6-201ENST00000416712 186 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 UQCRBP1-201ENST00000421129 336 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 MTCO1P51-201ENST00000427672 1060 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCLP35914 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCLP35914 RPL7AP28-201ENST00000464513 571 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 RN7SL354P-201ENST00000469282 294 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC025181.1-201ENST00000477507 416 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 RPS4XP18-201ENST00000495480 763 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCLP35914 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCLP35914 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCLP35914 AC137768.1-201ENST00000549998 553 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AP005119.2-201ENST00000579735 1105 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC069061.3-201ENST00000582254 823 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCLP35914 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCLP35914 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCLP35914 AL133243.1-201ENST00000614487 366 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 MIR7703-201ENST00000620784 77 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCLP35914 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
HMGCLP35914 HSPD1P14-201ENST00000432666 1618 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 AC087565.3-202ENST00000642085 1603 ntBASIC4.54□□□□□ -1.68
HMGCLP35914 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 AL672167.1-203ENST00000641299 2975 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms