Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXC13P31276 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 SAMMSON-226ENST00000642089 1582 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXC13P31276 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC13P31276 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXC13P31276 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC13P31276 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC13P31276 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.15□□□□□ -1.58
HOXC13P31276 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
HOXC13P31276 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC13P31276 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 RNU6-40P-201ENST00000384254 107 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXC13P31276 U3.22-201ENST00000391120 215 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 AF186996.5-201ENST00000418098 904 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AL138785.1-201ENST00000425821 331 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 CNOT7P1-201ENST00000429006 852 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 PPIAP13-201ENST00000434706 478 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 MRPL35P2-201ENST00000448009 511 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 TPT1P12-201ENST00000448968 492 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 RPL7P31-201ENST00000450192 724 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 CYCSP42-201ENST00000450823 238 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AC092691.2-201ENST00000461787 803 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 MTCO1P31-201ENST00000506355 492 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 RPL23AP53-201ENST00000521854 457 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC023158.1-201ENST00000561632 1025 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 AC005377.1-201ENST00000605126 456 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AC090525.3-201ENST00000605601 189 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AC242628.1-201ENST00000606810 391 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 AL109620.1-201ENST00000618738 1197 ntBASIC5.15□□□□□ -1.59
HOXC13P31276 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC13P31276 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC13P31276 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC13P31276 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXC13P31276 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HOXC13P31276 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC13P31276 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC13P31276 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC13P31276 AC120338.1-201ENST00000625074 1541 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC13P31276 AC026951.1-201ENST00000559530 2459 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC13P31276 AC011447.7-201ENST00000624228 1590 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 SNORD115-48-201ENST00000364764 76 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 Z86062.1-201ENST00000406773 777 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC13P31276 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 RPL35AP21-201ENST00000437667 333 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AC010733.1-201ENST00000451515 401 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXC13P31276 RN7SL41P-201ENST00000476144 297 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AC034205.1-201ENST00000520621 638 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 AGGF1P9-201ENST00000561884 913 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC13P31276 MIR3667-201ENST00000581025 74 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 EIF1P5-201ENST00000585002 234 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC13P31276 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXC13P31276 AL445423.1-201ENST00000609941 536 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC13P31276 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC13P31276 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HOXC13P31276 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC13P31276 ZNF652P1-201ENST00000442420 1309 ntBASIC5.14□□□□□ -1.59
HOXC13P31276 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC13P31276 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC13P31276 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms