Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40LGP29965 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 MIR3176-201ENST00000582210 90 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 EIF1P5-201ENST00000585002 234 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40LGP29965 VN1R84P-201ENST00000593697 235 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.1□□□□□ -1.75
CD40LGP29965 AC126915.2-201ENST00000610957 190 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 AC078899.5-201ENST00000612475 178 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 AL359513.1-201ENST00000614364 557 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40LGP29965 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.1□□□□□ -1.75
CD40LGP29965 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.1□□□□□ -1.75
CD40LGP29965 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 AL627171.1-201ENST00000618845 1308 ntBASIC4.1□□□□□ -1.75
CD40LGP29965 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CD40LGP29965 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40LGP29965 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40LGP29965 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40LGP29965 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40LGP29965 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CD40LGP29965 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD40LGP29965 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40LGP29965 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 AL139811.1-201ENST00000424779 2299 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 Y_RNA.62-201ENST00000362840 99 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD40LGP29965 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AL355433.1-201ENST00000422804 300 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 RPL23AP25-201ENST00000430973 463 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC093716.1-201ENST00000435923 377 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AL163193.1-201ENST00000444895 788 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40LGP29965 HMGB1P16-201ENST00000447155 540 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 RPL23AP71-201ENST00000470966 469 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40LGP29965 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC024558.1-201ENST00000505008 528 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AP001960.1-201ENST00000506494 658 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 HIGD1AP14-201ENST00000507617 282 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AL592156.1-201ENST00000508758 304 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC147055.3-201ENST00000510547 851 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40LGP29965 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40LGP29965 HAUS8P1-201ENST00000549005 542 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40LGP29965 TVP23CP2-201ENST00000571473 623 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 RN7SL753P-201ENST00000581238 290 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC020914.4-201ENST00000597690 277 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 ABI1P1-201ENST00000603375 1120 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 MIR6729-201ENST00000618194 65 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AL022401.1-201ENST00000619498 108 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC099494.2-201ENST00000623371 978 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD40LGP29965 AC233968.1-201ENST00000611212 1300 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40LGP29965 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 AC027287.1-201ENST00000553115 1453 ntBASIC4.09□□□□□ -1.75
CD40LGP29965 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40LGP29965 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40LGP29965 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.09□□□□□ -1.76
CD40LGP29965 AL031119.1-201ENST00000404707 1879 ntBASIC4.09□□□□□ -1.76
CD40LGP29965 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CD40LGP29965 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CD40LGP29965 AL136164.3-201ENST00000624429 3978 ntBASIC4.08□□□□□ -1.76
CD40LGP29965 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CD40LGP29965 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CD40LGP29965 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.08□□□□□ -1.76
CD40LGP29965 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CD40LGP29965 GJA6P-201ENST00000415117 1042 ntBASIC4.08□□□□□ -1.76
CD40LGP29965 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.08□□□□□ -1.76
CD40LGP29965 AC083899.2-201ENST00000423285 1376 ntBASIC4.08□□□□□ -1.76
CD40LGP29965 RPL7P4-203ENST00000430239 730 ntBASIC4.08□□□□□ -1.76
CD40LGP29965 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD40LGP29965 PRELID3BP10-201ENST00000431957 584 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms