Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC017002.4-201ENST00000604721 1525 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PTPN6P29350 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN6P29350 AL049555.1-201ENST00000562834 1933 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC103591.2-201ENST00000265259 766 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PTPN6P29350 RNU4-39P-201ENST00000362455 127 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN6P29350 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN6P29350 GSTM3P2-201ENST00000412746 530 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 COX6B1P1-201ENST00000415962 213 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN6P29350 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 AC073069.1-201ENST00000428657 441 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN6P29350 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 RPL31P44-201ENST00000447680 377 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 RPS3AP41-201ENST00000462701 778 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN6P29350 RPL7P16-201ENST00000479738 738 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC116562.1-201ENST00000485355 781 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 AC005912.1-201ENST00000495392 255 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.53□□□□□ -1.68
PTPN6P29350 BTF3P13-201ENST00000513224 490 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 RNU6-347P-201ENST00000516658 105 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN6P29350 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.53□□□□□ -1.68
PTPN6P29350 BRD9P1-201ENST00000529855 560 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 PCNPP1-201ENST00000552501 511 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 EDDM3DP-201ENST00000554692 434 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC015912.2-201ENST00000571053 181 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 HNRNPCP4-201ENST00000571636 900 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC022884.3-201ENST00000579571 248 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 MIR3934-201ENST00000579806 107 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC209154.1-201ENST00000582156 337 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.53□□□□□ -1.68
PTPN6P29350 AC005084.1-201ENST00000605160 304 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AL121932.1-201ENST00000605542 214 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AC009318.3-201ENST00000616916 503 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AL162233.1-201ENST00000620014 944 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN6P29350 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN6P29350 DDX6P1-205ENST00000441966 1436 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN6P29350 TLK1P1-201ENST00000456760 2440 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN6P29350 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN6P29350 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.53□□□□□ -1.69
PTPN6P29350 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
PTPN6P29350 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PTPN6P29350 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN6P29350 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN6P29350 AC022893.2-201ENST00000564832 3296 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
PTPN6P29350 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN6P29350 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN6P29350 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PTPN6P29350 RNA5SP443-201ENST00000363083 132 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 RPL37P18-201ENST00000411602 243 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN6P29350 LINC00993-201ENST00000420453 540 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AC073464.3-201ENST00000422564 712 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN6P29350 AC112498.1-201ENST00000444401 332 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 DEFB109F-201ENST00000491870 277 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN6P29350 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AC084757.1-201ENST00000559987 490 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN6P29350 AP001784.1-201ENST00000624107 428 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AL118508.4-201ENST00000624142 1176 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AC073342.3-201ENST00000624211 193 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 CR381572.2-201ENST00000624852 397 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN6P29350 IRF5P1-201ENST00000504852 2164 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 AL359715.4-201ENST00000606629 1436 ntBASIC4.52□□□□□ -1.69
PTPN6P29350 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN6P29350 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN6P29350 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN6P29350 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 AP000542.2-201ENST00000623199 6179 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN6P29350 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms