Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC099782.1-201ENST00000425889 474 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 ARAFP2-201ENST00000440565 559 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 AL592447.1-201ENST00000447592 540 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC092865.4-201ENST00000477936 615 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 RPL9P33-201ENST00000484311 566 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AL035404.1-201ENST00000497982 568 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC008629.2-201ENST00000503783 483 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC006499.5-201ENST00000505037 514 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 OR7E99P-201ENST00000505750 922 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC138832.1-201ENST00000522871 556 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC010487.1-201ENST00000594408 1172 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 NDUFA8P1-201ENST00000605525 367 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC145423.1-201ENST00000605712 336 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AL451049.1-201ENST00000608672 497 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC138749.5-201ENST00000611461 208 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 RFPL4AP6-201ENST00000616792 846 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL6A2P12110 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL6A2P12110 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 AC006484.1-201ENST00000435086 1884 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AC046144.1-201ENST00000478559 1853 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.82□□□□□ -1.48
COL6A2P12110 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL6A2P12110 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL6A2P12110 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL6A2P12110 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL6A2P12110 RNU6-839P-201ENST00000363347 108 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 RN7SKP78-201ENST00000364711 318 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL6A2P12110 SNORA75-201ENST00000384158 137 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 MIR188-201ENST00000385034 86 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 RNU6-1300P-201ENST00000391046 108 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AL161909.1-201ENST00000397390 712 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.82□□□□□ -1.48
COL6A2P12110 MIR1303-201ENST00000408625 86 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.82□□□□□ -1.48
COL6A2P12110 RPSAP65-201ENST00000429660 595 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC242426.1-201ENST00000435270 960 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 RPS25P9-201ENST00000435591 252 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.82□□□□□ -1.48
COL6A2P12110 RPS12P17-201ENST00000438591 377 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 MTATP6P23-201ENST00000440153 476 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC104306.1-201ENST00000449702 371 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 SNRPGP9-201ENST00000456025 225 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.82□□□□□ -1.48
COL6A2P12110 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.82□□□□□ -1.48
COL6A2P12110 RPL29P23-201ENST00000486188 442 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AP002453.1-201ENST00000492327 668 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 AC090071.1-201ENST00000507713 644 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.82□□□□□ -1.48
COL6A2P12110 AP001000.1-201ENST00000526843 742 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AL139174.1-201ENST00000531489 886 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.82□□□□□ -1.48
COL6A2P12110 AC245505.1-201ENST00000556398 224 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.82□□□□□ -1.48
COL6A2P12110 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.82□□□□□ -1.48
COL6A2P12110 TXNP4-201ENST00000575018 310 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC012254.3-201ENST00000591183 2117 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC083899.3-201ENST00000603413 594 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC093765.1-201ENST00000603758 881 ntBASIC5.82□□□□□ -1.48
COL6A2P12110 AC091946.2-201ENST00000606105 291 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms