Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.4□□□□□ -1.71
MT-ND1P03886 RPL23AP56-201ENST00000460778 453 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 RN7SL214P-201ENST00000487317 265 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 HMGB1P3-201ENST00000502802 616 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC004980.4-201ENST00000513375 203 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 LINC00557-201ENST00000563184 1279 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC027455.1-201ENST00000574104 594 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 MIR1269B-201ENST00000580405 75 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC090312.1-201ENST00000580637 348 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.4□□□□□ -1.71
MT-ND1P03886 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC006116.3-201ENST00000592968 361 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AL133247.2-201ENST00000603236 482 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 MEMO1P5-201ENST00000604810 406 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AL512506.1-201ENST00000613918 449 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC023509.5-201ENST00000617434 807 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC079298.2-201ENST00000623885 459 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MT-ND1P03886 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC114546.3-201ENST00000623582 1734 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC017002.4-201ENST00000604721 1525 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
MT-ND1P03886 OR56B2P-201ENST00000317102 954 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.39□□□□□ -1.71
MT-ND1P03886 RNU6-171P-201ENST00000384354 107 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 SNORA70-201ENST00000384436 135 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 RNU1-82P-201ENST00000390851 165 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 RNU6-244P-201ENST00000391028 104 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AP002530.1-201ENST00000405705 684 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 CEACAMP8-201ENST00000413902 580 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 GJA6P-201ENST00000415117 1042 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.39□□□□□ -1.71
MT-ND1P03886 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.39□□□□□ -1.71
MT-ND1P03886 BX284632.1-201ENST00000478218 541 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC090543.1-201ENST00000492168 485 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 STMN1P2-201ENST00000508435 439 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
MT-ND1P03886 SMARCE1P4-201ENST00000523647 241 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 SUMO2P15-201ENST00000604285 278 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AC092953.2-201ENST00000608000 699 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AC016957.2-201ENST00000616998 848 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AC131238.1-201ENST00000617135 328 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC007342.8-201ENST00000623278 678 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
MT-ND1P03886 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MT-ND1P03886 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC096656.1-201ENST00000623826 1364 ntBASIC4.39□□□□□ -1.71
MT-ND1P03886 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MT-ND1P03886 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC099654.2-201ENST00000433031 1980 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AL590763.1-201ENST00000398297 1545 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms