Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.09□□□□□ -1.75
SGCEO43556 RNU2-30P-201ENST00000516209 141 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 SOX5P1-201ENST00000524155 1127 ntBASIC4.09□□□□□ -1.75
SGCEO43556 BRD9P1-201ENST00000529855 560 ntBASIC4.09□□□□□ -1.75
SGCEO43556 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.09□□□□□ -1.75
SGCEO43556 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 AC005520.3-201ENST00000602874 370 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
SGCEO43556 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 AL669942.2-201ENST00000620352 697 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AC009950.2-201ENST00000636548 183 ntBASIC4.09□□□□□ -1.75
SGCEO43556 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SGCEO43556 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SGCEO43556 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SGCEO43556 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SGCEO43556 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SGCEO43556 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 MIR365B-201ENST00000362317 111 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AL603766.1-201ENST00000407763 664 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.08□□□□□ -1.76
SGCEO43556 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 AC004448.2-201ENST00000422360 586 ntBASIC4.08□□□□□ -1.76
SGCEO43556 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.08□□□□□ -1.76
SGCEO43556 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 AC104837.2-201ENST00000427236 424 ntBASIC4.08□□□□□ -1.76
SGCEO43556 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 PA2G4P6-201ENST00000438325 1197 ntBASIC4.08□□□□□ -1.76
SGCEO43556 RPL12P3-201ENST00000440080 396 ntBASIC4.08□□□□□ -1.76
SGCEO43556 ELOCP10-201ENST00000440624 327 ntBASIC4.08□□□□□ -1.76
SGCEO43556 Z80107.2-201ENST00000445127 392 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AL355852.1-201ENST00000454081 1771 ntBASIC4.08□□□□□ -1.76
SGCEO43556 RPS3AP53-201ENST00000454716 778 ntBASIC4.08□□□□□ -1.76
SGCEO43556 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 AC105918.1-201ENST00000474399 838 ntBASIC4.08□□□□□ -1.76
SGCEO43556 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 AL110118.1-201ENST00000553543 400 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC018552.3-201ENST00000567416 561 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.08□□□□□ -1.76
SGCEO43556 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.08□□□□□ -1.76
SGCEO43556 MIR4737-201ENST00000583979 81 ntBASIC4.08□□□□□ -1.76
SGCEO43556 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 AL139395.1-201ENST00000603662 160 ntBASIC4.08□□□□□ -1.76
SGCEO43556 ELOCP34-201ENST00000604436 327 ntBASIC4.08□□□□□ -1.76
SGCEO43556 IMMP1LP1-201ENST00000605170 488 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC004948.1-201ENST00000609858 672 ntBASIC4.08□□□□□ -1.76
SGCEO43556 MIR6853-201ENST00000619642 74 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AL445528.2-201ENST00000620582 470 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC015722.2-201ENST00000622210 551 ntBASIC4.08□□□□□ -1.76
SGCEO43556 AC009229.4-201ENST00000623854 1947 ntBASIC4.08□□□□□ -1.76
SGCEO43556 OR11H5P-202ENST00000641612 1325 ntBASIC4.08□□□□□ -1.76
SGCEO43556 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
SGCEO43556 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SGCEO43556 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.07□□□□□ -1.76
SGCEO43556 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 IQCB2P-201ENST00000401788 1633 ntBASIC4.07□□□□□ -1.76
SGCEO43556 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
SGCEO43556 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.07□□□□□ -1.76
SGCEO43556 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.07□□□□□ -1.76
SGCEO43556 AC010132.2-201ENST00000295493 1043 ntBASIC4.07□□□□□ -1.76
SGCEO43556 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SGCEO43556 OR56B2P-201ENST00000317102 954 ntBASIC4.07□□□□□ -1.76
SGCEO43556 MIR195-201ENST00000385194 87 ntBASIC4.07□□□□□ -1.76
SGCEO43556 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 RNU6-603P-201ENST00000411403 107 ntBASIC4.07□□□□□ -1.76
SGCEO43556 OR51B3P-201ENST00000412287 913 ntBASIC4.07□□□□□ -1.76
SGCEO43556 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.07□□□□□ -1.76
SGCEO43556 AC140479.3-201ENST00000418944 1126 ntBASIC4.07□□□□□ -1.76
SGCEO43556 RPS26P13-201ENST00000419030 330 ntBASIC4.07□□□□□ -1.76
SGCEO43556 OR6K4P-201ENST00000423179 955 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC097523.2-201ENST00000435551 652 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC005154.2-201ENST00000438110 379 ntBASIC4.07□□□□□ -1.76
SGCEO43556 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.07□□□□□ -1.76
SGCEO43556 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.07□□□□□ -1.76
SGCEO43556 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.07□□□□□ -1.76
SGCEO43556 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.07□□□□□ -1.76
SGCEO43556 RPL32P9-201ENST00000487963 407 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms