Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.58□□□□□ -1.2
CUX2O14529 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC7.58□□□□□ -1.2
CUX2O14529 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.58□□□□□ -1.2
CUX2O14529 MIR4433B-201ENST00000581329 102 ntBASIC7.58□□□□□ -1.2
CUX2O14529 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.58□□□□□ -1.2
CUX2O14529 Z95327.3-201ENST00000610385 572 ntBASIC7.58□□□□□ -1.2
CUX2O14529 RN7SL853P-201ENST00000617250 223 ntBASIC7.58□□□□□ -1.2
CUX2O14529 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CUX2O14529 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.58□□□□□ -1.2
CUX2O14529 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUX2O14529 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.58□□□□□ -1.2
CUX2O14529 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.58□□□□□ -1.2
CUX2O14529 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CUX2O14529 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.57□□□□□ -1.2
CUX2O14529 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.57□□□□□ -1.2
CUX2O14529 COX6B1P7-201ENST00000430845 235 ntBASIC7.57□□□□□ -1.2
CUX2O14529 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.57□□□□□ -1.2
CUX2O14529 CDH12P2-201ENST00000504393 298 ntBASIC7.57□□□□□ -1.2
CUX2O14529 WBP1LP4-201ENST00000505043 344 ntBASIC7.57□□□□□ -1.2
CUX2O14529 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.57□□□□□ -1.2
CUX2O14529 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.57□□□□□ -1.2
CUX2O14529 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.57□□□□□ -1.2
CUX2O14529 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.57□□□□□ -1.2
CUX2O14529 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.57□□□□□ -1.2
CUX2O14529 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.57□□□□□ -1.2
CUX2O14529 AC010608.2-201ENST00000624830 470 ntBASIC7.57□□□□□ -1.2
CUX2O14529 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUX2O14529 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUX2O14529 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 AC108032.1-201ENST00000416706 207 ntBASIC7.56□□□□□ -1.2
CUX2O14529 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.56□□□□□ -1.2
CUX2O14529 AC099522.1-202ENST00000514718 367 ntBASIC7.56□□□□□ -1.2
CUX2O14529 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.56□□□□□ -1.2
CUX2O14529 AL031985.2-201ENST00000600955 480 ntBASIC7.56□□□□□ -1.2
CUX2O14529 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.56□□□□□ -1.2
CUX2O14529 AC008833.1-201ENST00000611633 691 ntBASIC7.56□□□□□ -1.2
CUX2O14529 CR392039.4-201ENST00000624968 501 ntBASIC7.56□□□□□ -1.2
CUX2O14529 AC073136.1-201ENST00000449426 2884 ntBASIC7.56□□□□□ -1.2
CUX2O14529 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.56□□□□□ -1.2
CUX2O14529 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CUX2O14529 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUX2O14529 AP001642.1-201ENST00000624727 2117 ntBASIC7.56□□□□□ -1.2
CUX2O14529 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CUX2O14529 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.56□□□□□ -1.2
CUX2O14529 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 AC013429.2-201ENST00000418798 781 ntBASIC7.55□□□□□ -1.2
CUX2O14529 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 GAPDHP36-201ENST00000480688 918 ntBASIC7.55□□□□□ -1.2
CUX2O14529 AC098799.3-201ENST00000506095 438 ntBASIC7.55□□□□□ -1.2
CUX2O14529 AC138832.1-201ENST00000522871 556 ntBASIC7.55□□□□□ -1.2
CUX2O14529 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.55□□□□□ -1.2
CUX2O14529 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC7.55□□□□□ -1.2
CUX2O14529 FAM27D1-201ENST00000612308 341 ntBASIC7.55□□□□□ -1.2
CUX2O14529 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 ZNF833P-201ENST00000424938 1494 ntBASIC7.55□□□□□ -1.2
CUX2O14529 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 LINC00622-201ENST00000562811 1570 ntBASIC7.55□□□□□ -1.2
CUX2O14529 AC233263.6-201ENST00000631132 1963 ntBASIC7.55□□□□□ -1.2
CUX2O14529 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.55□□□□□ -1.2
CUX2O14529 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.55□□□□□ -1.2
CUX2O14529 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUX2O14529 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.55□□□□□ -1.2
CUX2O14529 AL935212.3-201ENST00000450729 284 ntBASIC7.55□□□□□ -1.2
CUX2O14529 GAS5-223ENST00000452197 483 ntTSL 3 BASIC7.55□□□□□ -1.2
CUX2O14529 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.55□□□□□ -1.2
CUX2O14529 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.55□□□□□ -1.2
CUX2O14529 DEFB109A-201ENST00000482450 265 ntBASIC7.55□□□□□ -1.2
CUX2O14529 KCTD9P2-201ENST00000512203 1013 ntBASIC7.55□□□□□ -1.2
CUX2O14529 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.55□□□□□ -1.2
CUX2O14529 GTF2IP22-201ENST00000554443 182 ntBASIC7.55□□□□□ -1.2
CUX2O14529 MIR7975-201ENST00000619350 68 ntBASIC7.55□□□□□ -1.2
CUX2O14529 FRG1EP-201ENST00000634469 770 ntBASIC7.55□□□□□ -1.2
CUX2O14529 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC7.55□□□□□ -1.2
CUX2O14529 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.54□□□□□ -1.2
CUX2O14529 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.54□□□□□ -1.2
CUX2O14529 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CUX2O14529 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CUX2O14529 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
CUX2O14529 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CUX2O14529 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CUX2O14529 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CUX2O14529 OR52E6-202ENST00000379946 954 ntBASIC7.54□□□□□ -1.2
CUX2O14529 RNVU1-14-201ENST00000384770 164 ntBASIC7.54□□□□□ -1.2
CUX2O14529 AC007738.1-201ENST00000413892 348 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms