Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 AL161616.1-201ENST00000611867 286 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AP005019.3-201ENST00000620418 560 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AL049536.1-201ENST00000625043 744 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SDCBPO00560 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.66□□□□□ -1.82
SDCBPO00560 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SDCBPO00560 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SDCBPO00560 SNORD113.2-201ENST00000364166 89 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.66□□□□□ -1.82
SDCBPO00560 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 MIR659-201ENST00000384963 97 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 AL133270.1-201ENST00000402635 279 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 UQCRBP1-201ENST00000421129 336 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AL034379.1-201ENST00000423216 253 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 NANOGP6-201ENST00000429190 847 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AL359265.2-201ENST00000434367 631 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.66□□□□□ -1.82
SDCBPO00560 RPL36AP15-201ENST00000444514 266 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 ARL2BPP10-201ENST00000446487 531 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.66□□□□□ -1.82
SDCBPO00560 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 AC112184.1-201ENST00000505179 312 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.66□□□□□ -1.82
SDCBPO00560 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.66□□□□□ -1.82
SDCBPO00560 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 RN7SL690P-201ENST00000582087 240 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 OR1AB1P-201ENST00000585564 761 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AC124856.1-201ENST00000600819 896 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.66□□□□□ -1.82
SDCBPO00560 MIR432-201ENST00000606207 94 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AC012603.1-201ENST00000606424 528 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AC100827.5-201ENST00000615883 426 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 AC021106.3-201ENST00000623925 531 ntBASIC3.66□□□□□ -1.82
SDCBPO00560 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SDCBPO00560 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SDCBPO00560 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.66□□□□□ -1.82
SDCBPO00560 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.65□□□□□ -1.82
SDCBPO00560 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SDCBPO00560 SNORA70F-201ENST00000384142 135 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 GLULP6-201ENST00000399502 913 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 TRIM60P17-201ENST00000415181 719 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SDCBPO00560 NDUFA5P1-201ENST00000433858 341 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 SEPT14P1-201ENST00000458703 648 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 RPL7P22-201ENST00000466005 733 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.65□□□□□ -1.83
SDCBPO00560 OR9N1P-201ENST00000491296 333 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AC017037.1-201ENST00000508460 471 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 HNRNPKP5-201ENST00000515300 253 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 UBTFL9-201ENST00000534504 1148 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.65□□□□□ -1.83
SDCBPO00560 AL358913.1-201ENST00000554342 121 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AC124068.1-201ENST00000563131 678 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.65□□□□□ -1.83
SDCBPO00560 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.65□□□□□ -1.83
SDCBPO00560 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.65□□□□□ -1.83
SDCBPO00560 Mico1.1-201ENST00000611698 204 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 AC006840.1-201ENST00000623069 542 ntBASIC3.65□□□□□ -1.83
SDCBPO00560 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.65□□□□□ -1.83
SDCBPO00560 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SDCBPO00560 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.65□□□□□ -1.83
SDCBPO00560 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SDCBPO00560 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SDCBPO00560 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.65□□□□□ -1.83
SDCBPO00560 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDCBPO00560 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.64□□□□□ -1.83
SDCBPO00560 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.64□□□□□ -1.83
SDCBPO00560 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDCBPO00560 AC092111.2-201ENST00000611627 1414 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SDCBPO00560 OR4K15-201ENST00000305051 1216 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 RN7SKP224-201ENST00000364140 325 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 SNORA58B-201ENST00000364259 136 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 MIR137-201ENST00000385223 102 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.64□□□□□ -1.83
SDCBPO00560 ELOCP8-201ENST00000439309 332 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 ELOCP15-201ENST00000442090 332 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 AC073264.2-201ENST00000448886 166 ntBASIC3.64□□□□□ -1.83
SDCBPO00560 RPL35AP15-201ENST00000468042 339 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms