Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC084783.1-201ENST00000565846 910 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC005191.1-201ENST00000603950 358 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL139041.1-201ENST00000605480 610 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC012557.1-201ENST00000607115 611 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL121873.1-201ENST00000616013 524 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC00901.1-201ENST00000617252 152 ntBASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL391684.1-202ENST00000641293 1636 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNU1-44P-201ENST00000384453 163 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TRAV35-201ENST00000390462 330 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC233289.1-201ENST00000403700 508 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL356968.2-201ENST00000412769 1257 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 UBTFL3-201ENST00000418934 1024 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC002553.2-201ENST00000453217 340 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ISCUP1-201ENST00000454451 448 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 UBTFL6-201ENST00000477929 1024 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC068587.1-201ENST00000483613 781 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC090013.1-201ENST00000485147 480 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 IGLVIV-65-201ENST00000517313 360 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 DYNLL1P4-201ENST00000549314 266 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL121834.1-201ENST00000572284 509 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ADAD1P2-201ENST00000588476 646 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNU6-84P-201ENST00000607737 102 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL445423.1-201ENST00000609941 536 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC023509.5-201ENST00000617434 807 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MTND4P26-201ENST00000415971 1359 ntBASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AL356317.1-201ENST00000396110 1436 ntBASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.84
TCRBV4S1A1TA0A5B7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RAD17P1-201ENST00000418130 2042 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC026951.1-201ENST00000559530 2459 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RNA5SP151-201ENST00000365632 117 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC062016.2-201ENST00000420950 676 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RPL12P34-201ENST00000424532 479 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC069285.2-201ENST00000440210 275 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RPL21P126-201ENST00000470049 478 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC008694.2-201ENST00000517591 306 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 MYL12AP1-201ENST00000518490 515 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC021733.2-201ENST00000518830 497 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 MTND6P33-201ENST00000571794 183 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC083809.1-201ENST00000615051 472 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AL138721.1-201ENST00000616756 179 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 MIR7154-201ENST00000620673 73 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 MIR6830-201ENST00000636015 70 ntBASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV4S1A1TA0A5B7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC021146.4-201ENST00000309229 279 ntBASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC126755.2-208ENST00000327792 462 ntBASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AC138969.1-213ENST00000331436 462 ntBASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
TCRBV4S1A1TA0A5B7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms