Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AC090971.4-201ENST00000560291 1800 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AL590240.1-201ENST00000334118 313 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 SNORA58B-201ENST00000364259 136 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 RNA5SP39-201ENST00000411245 120 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 RPL21P43-201ENST00000425440 472 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 YWHAEP5-201ENST00000431545 765 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 MAPRE1P3-201ENST00000435438 796 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AL935212.3-201ENST00000450729 284 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 SYT14P1-201ENST00000481459 721 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 HNRNPKP5-201ENST00000515300 253 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AC008147.3-201ENST00000548666 354 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 QTRT1P1-201ENST00000604344 1078 ntBASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC107021.2-201ENST00000567714 2095 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL391684.1-202ENST00000641293 1636 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 SDHCP2-201ENST00000398565 501 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 NCSTNP1-201ENST00000406229 144 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 UBTFL3-201ENST00000418934 1024 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL590762.4-201ENST00000425885 253 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL360081.1-201ENST00000428299 555 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL162388.1-201ENST00000450912 352 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 ISCUP1-201ENST00000454451 448 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 UBTFL6-201ENST00000477929 1024 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC008897.1-201ENST00000494006 347 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AK4P6-201ENST00000505168 528 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 KCTD9P6-201ENST00000522306 950 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 IFITM8P-201ENST00000522529 394 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC091178.1-203ENST00000584586 279 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC025946.2-201ENST00000603398 234 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL133338.2-201ENST00000604292 736 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC008966.2-201ENST00000606157 453 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL353726.1-201ENST00000614041 1000 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC091953.3-201ENST00000623220 236 ntBASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DRB4X5D2U9 AC015813.6-201ENST00000624409 5808 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 MAPK10-304ENST00000641341 3984 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 RNU6-1263P-201ENST00000384601 106 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AL035419.1-201ENST00000397037 564 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 HSPD1P16-201ENST00000402302 394 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 FCF1P5-201ENST00000406490 482 ntBASIC3.41□□□□□ -1.86
HLA-DRB4X5D2U9 AL603766.1-201ENST00000407763 664 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms