Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RN7SKP99-201ENST00000517028 307 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 CDC42P3-201ENST00000518493 633 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AP001207.1-201ENST00000524051 481 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 OR4C2P-201ENST00000530855 1064 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC017100.2-201ENST00000584628 355 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 FKBP1AP1-201ENST00000594588 318 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 MTND3P19-201ENST00000603825 345 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC025588.2-201ENST00000604851 466 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC007349.4-201ENST00000608114 532 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AL031658.2-201ENST00000616850 651 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RNA5SP439-201ENST00000617595 124 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC093849.1-201ENST00000563631 2209 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC007618.1-201ENST00000366455 732 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 PRRC2CP1-201ENST00000404428 159 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 RPSAP35-201ENST00000413753 818 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 PRELID3BP11-201ENST00000414230 479 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL133482.1-201ENST00000415988 498 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC019050.1-201ENST00000418508 492 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC007435.1-201ENST00000421086 415 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL450326.2-201ENST00000421913 1962 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL158073.1-201ENST00000426848 1104 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL12P28-201ENST00000430852 489 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 CYCSP12-201ENST00000437729 300 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC092393.1-201ENST00000439625 742 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL359265.1-201ENST00000440296 795 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 REG1CP-206ENST00000447469 496 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC079776.3-201ENST00000450665 370 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL21P71-201ENST00000465598 459 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC092593.2-201ENST00000513866 913 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 RFPL4AP5-201ENST00000514977 504 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 RNU6-488P-201ENST00000515918 99 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AADACP1-206ENST00000561502 1193 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL360270.2-201ENST00000562952 5985 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 SUMO2P15-201ENST00000604285 278 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC243756.2-201ENST00000618406 463 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AL158163.2-201ENST00000619110 700 ntBASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.12□□□□□ -1.43
COL4A3BPQ9Y5P4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 Z99496.1-201ENST00000469424 1477 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC079097.1-201ENST00000512187 1399 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms