Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR3912-201ENST00000577566 105 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 MIR4700-201ENST00000578311 74 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC093765.1-201ENST00000603758 881 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC021749.1-201ENST00000604322 607 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC105227.2-201ENST00000615075 605 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC025574.2-201ENST00000615621 514 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL158163.2-201ENST00000619110 700 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL356863.1-201ENST00000623378 1080 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC000095.2-202ENST00000637415 154 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL360270.2-201ENST00000562952 5985 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AP005435.3-201ENST00000531260 3198 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AP005901.5-201ENST00000545779 1796 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 HMGB1P5-201ENST00000255320 642 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 TMSB4XP8-201ENST00000402089 135 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 HNRNPDP2-201ENST00000406475 478 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 TMSB4XP6-201ENST00000415187 135 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 TMSB4XP1-201ENST00000424567 135 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 FAM96AP1-201ENST00000430879 482 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RPS27P18-201ENST00000431701 247 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 OR6D1P-201ENST00000436165 939 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 GAPDHP58-201ENST00000438477 1006 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 TPTE2P3-201ENST00000441562 1189 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RAB11AP1-201ENST00000442978 646 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 GEMIN8P3-201ENST00000445417 720 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 HMGB1P16-201ENST00000447155 540 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC004022.1-201ENST00000447766 1066 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC104306.1-201ENST00000449702 371 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC011225.1-201ENST00000457751 369 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC010683.1-201ENST00000473673 378 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC011037.1-201ENST00000483964 558 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC093270.2-201ENST00000486157 792 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RPS23P1-201ENST00000491662 432 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 FTH1P24-201ENST00000503502 462 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC092593.2-201ENST00000513866 913 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RN7SKP287-201ENST00000516546 266 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 RNA5SP135-201ENST00000517019 125 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 PMS2P3-207ENST00000529061 717 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC004825.1-201ENST00000555068 586 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 MTND3P19-201ENST00000603825 345 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC093424.1-201ENST00000604999 338 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AL118522.2-201ENST00000616045 615 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC118658.2-201ENST00000618697 459 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC097520.1-201ENST00000624435 385 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 AC235565.1-201ENST00000456962 1325 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 TCP11X1-202ENST00000622971 1372 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.11□□□□□ -1.59
LRFN1Q9P244 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms